Bernhards key bindings for coot.py

add_key_binding("Refine Active Residue", "r", lambda: manual_refine_residues(0)) add_key_binding("Refine Active Residue AA", "x", lambda: refine_active_residue()) add_key_binding("Triple Refine", "t", lambda: manual_refine_residues(1)) add_key_binding("Triple Refine AA", "h", lambda: refine_active_residue_triple()) add_key_binding("Autofit Rotamer", "j", lambda: auto_fit_rotamer_active_residue()) add_key_binding("Pepflip", "q", lambda: pepflip_active_residue()) add_key_binding("Got To Blob", "g", lambda: blob_under_pointer_to_screen_centre()) add_key_binding("Add Water", "w", lambda: place_typed_atom_at_pointer("Water")) add_key_binding("Eigen-flip Ligand", "e", lambda: flip_active_ligand())

def key_binding_func_1():

   active_atom = active_residue()
   if (not active_atom):
       print "No active atom"
   else:
       imol      = active_atom[0]
       chain_id  = active_atom[1]
       res_no    = active_atom[2]
       ins_code  = active_atom[3]
       atom_name = active_atom[4]
       alt_conf  = active_atom[5]
       add_terminal_residue(imol, chain_id, res_no, "auto", 1)

add_key_binding("Add terminal residue", "y", lambda: key_binding_func_1())

def key_binding_func_2():

   active_atom = active_residue()
   if (not active_atom):
       print "No active atom"
   else:
       imol      = active_atom[0]
       chain_id  = active_atom[1]
       res_no    = active_atom[2]
       ins_code  = active_atom[3]
       atom_name = active_atom[4]
       alt_conf  = active_atom[5]
       fill_partial_residue(imol, chain_id, res_no, ins_code)

add_key_binding("Fill Partial", "k", lambda: key_binding_func_2())

def key_binding_func_3():

   if (os.name == 'nt'):
       home = os.getenv('COOT_HOME')
   else:
       home = os.getenv('HOME')
   dir_1 = os.path.join(home, "data", "rnase")
   read_pdb(os.path.join(dir_1, "tutorial-modern.pdb"))
   make_and_draw_map(os.path.join(dir_1, "rnasa-1.8-all_refmac1.mtz"),
                     "/RNASE3GMP/COMPLEX/FWT",
                     "/RNASE3GMP/COMPLEX/PHWT",
                     "", 0, 0)

add_key_binding("Load RNAs files", "F9", lambda: key_binding_func_3())

def key_binding_func_4():

   keyboard_ghosts_mol = -1
   for mol in model_molecule_list():
       if (ncs_ghosts(mol)):
           keyboard_ghosts_mol = mol
           break
   if (draw_ncs_ghosts_state(keyboard_ghosts_mol) == 0):
       make_ncs_ghosts_maybe(keyboard_ghosts_mol)
       set_draw_ncs_ghosts(keyboard_ghosts_mol, 1)
   else:
       set_draw_ncs_ghosts(keyboard_ghosts_mol, 0)

add_key_binding("Toggle Ghosts", ":", lambda: key_binding_func_4()) add_key_binding("Hydrogens off", "(", lambda: set_draw_hydrogens(0, 0)) add_key_binding("Hydrogens on", ")", lambda: set_draw_hydrogens(0, 1))

def key_binding_func_5():

   active_atom = active_residue()
   if (not active_atom):
       add_status_bar_text("No active residue")
   else:
       imol      = active_atom[0]
       chain_id  = active_atom[1]
       res_no    = active_atom[2]
       ins_code  = active_atom[3]
       atom_name = active_atom[4]
       alt_conf  = active_atom[5]
       name = get_rotamer_name(imol, chain_id, res_no, ins_code)
       if (not name):
           add_status_bar_text("No Name found")
       else:
           if (name == ""):
               add_status_bar_text("No name for this")
           else:
               add_status_bar_text("Rotamer name: " + name)

add_key_binding("Rotamer name in Status Bar", "~", lambda: key_binding_func_5())