Topics: Difference between revisions
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* [[symmetry and space groups]] | * [[symmetry and space groups]] | ||
* [[R-factors]] | * [[R-factors]] | ||
* [[direct methods]] | |||
* [[experimental phasing]] | |||
* [[molecular replacement]] | |||
=== Programs === | === Programs === | ||
==== | ==== by package (large packages first) ==== | ||
* [[CCP4]] | * [[CCP4]] | ||
* [[CNS]] | * [[CNS]] | ||
* [[PHENIX]] | * [[PHENIX]] | ||
* [[SHELX C/D/E]] (homepage at [http://shelx.uni-ac.gwdg.de/SHELX]) | * [[SHELX C/D/E]] (homepage at [http://shelx.uni-ac.gwdg.de/SHELX]) | ||
* XDS [http://www.mpimf-heidelberg.mpg.de/~kabsch/xds homepage] and [http://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/XDS XDSwiki] | * XDS [http://www.mpimf-heidelberg.mpg.de/~kabsch/xds homepage] and [http://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/XDS XDSwiki] | ||
* ... | * ... | ||
==== by task ==== | |||
* [[Data reduction]] | |||
* [[Molecular replacement (MR)]] | |||
* [[Experimental phasing (SIR/MIR and SAD/MAD)]] | |||
* [[Refinement]] | |||
== Bioinformatics and computers == | == Bioinformatics and computers == | ||
Revision as of 14:20, 7 February 2008
Expression and Purification
- Expression systems
- Purification
- Cleavage: wanted and unwanted
- Expression and Purification: Tips and Tricks
Crystals
Crystal growth and manipulation
- Crystallization screens and methods
- Robots for crystallization setup
- Visualization of crystal growth
- Robots for crystal mounting
- Crystal growth: Tips and Tricks
Data collection
Crystallography
Theory
- Anomalous scattering
- Friedel's law
- centric and acentric reflections
- choice of origin
- ways to index a diffraction pattern
- symmetry and space groups
- R-factors
- direct methods
- experimental phasing
- molecular replacement
Programs
by package (large packages first)
by task
Bioinformatics and computers
- Servers for sequence analysis (e.g. alignment)
- Servers for structure analysis
- Prediction of structure from sequence: servers and programs
- Visualization: programs, graphics cards and 3D
- Computer hardware