CCP4mg: Difference between revisions
Jump to navigation
Jump to search
Biophysics (talk | contribs) (ccp4mg installation) |
Biophysics (talk | contribs) |
||
| (One intermediate revision by the same user not shown) | |||
| Line 2: | Line 2: | ||
===Installation help for CCP4mg=== | ===Installation help for CCP4mg=== | ||
Download the file [http://www.ysbl.york.ac.uk/~ccp4mg/download2/ccp4mg-1.107.3-Linux-Fedora-6-i386.tar.gz ccp4mg-1.107.3-Linux-Fedora-6-i386.tar.gz] | Download the file [http://www.ysbl.york.ac.uk/~ccp4mg/download2/ccp4mg-1.107.3-Linux-Fedora-6-i386.tar.gz ccp4mg-1.107.3-Linux-Fedora-6-i386.tar.gz] | ||
<pre> | <pre> | ||
wget http://www.ysbl.york.ac.uk/~ccp4mg/download2/ccp4mg-1.107.3-Linux-Fedora-6-i386.tar.gz | wget http://www.ysbl.york.ac.uk/~ccp4mg/download2/ccp4mg-1.107.3-Linux-Fedora-6-i386.tar.gz | ||
</pre> | </pre> | ||
Now "cd" to the installation directory of CCP4i and extract it there. | Now "cd" to the installation directory of CCP4i and extract it there. TODO: Does it work if I install it anywhere else ? | ||
<pre> | <pre> | ||
cd /software/linuxsoft/ccp4-6.1.1 | cd /software/linuxsoft/ccp4-6.1.1 | ||
| Line 14: | Line 14: | ||
Now, Add the binary ccp4mg to your $PATH and then open a new terminal or source your shell | Now, Add the binary ccp4mg to your $PATH and then open a new terminal or source your shell | ||
<pre> | <pre> | ||
setenv PATH ccp4mg-1.107.3/bin:${PATH} | setenv PATH /software/linuxsoft/ccp4-6.1.1/ccp4mg-1.107.3/bin:${PATH} | ||
source .cshrc | source .cshrc | ||
</pre> | </pre> | ||
| Line 22: | Line 22: | ||
</pre> | </pre> | ||
====FAQ==== | ====FAQ==== | ||
I get the error <pre>Segmentation fault</pre> | * I get the error <pre>Segmentation fault</pre> | ||
Edit the file <pre>ccp4mg-1.107.3/qtgui/MGMainWindow.py</pre> | Edit the file <pre>ccp4mg-1.107.3/qtgui/MGMainWindow.py</pre> | ||
and replace | and replace | ||
| Line 32: | Line 32: | ||
stereoAvailable = 0 | stereoAvailable = 0 | ||
</pre> | </pre> | ||
* This version of ccp4mg '''cannot''' be launched from ccp4i GUI. | |||
Latest revision as of 18:12, 23 May 2009
CCP4mg is the quick and easy way to create beautiful publication quality images and movies. It is also the easy way to superpose and analyse structures (Ref: from the website).
Installation help for CCP4mg[edit | edit source]
Download the file ccp4mg-1.107.3-Linux-Fedora-6-i386.tar.gz
wget http://www.ysbl.york.ac.uk/~ccp4mg/download2/ccp4mg-1.107.3-Linux-Fedora-6-i386.tar.gz
Now "cd" to the installation directory of CCP4i and extract it there. TODO: Does it work if I install it anywhere else ?
cd /software/linuxsoft/ccp4-6.1.1 tar zxvf ccp4mg-1.107.3-Linux-Fedora-6-i386.tar.gz
Now, Add the binary ccp4mg to your $PATH and then open a new terminal or source your shell
setenv PATH /software/linuxsoft/ccp4-6.1.1/ccp4mg-1.107.3/bin:${PATH}
source .cshrc
Launch ccp4mg with
ccp4mg &
FAQ[edit | edit source]
- I get the error
Segmentation fault
Edit the file
ccp4mg-1.107.3/qtgui/MGMainWindow.py
and replace
stereoAvailable = opengl.CheckIfStereoAvailable()
with the following. Remember to keep the indent (i.e) left tab/spacing (I hate python)
stereoAvailable = 0
- This version of ccp4mg cannot be launched from ccp4i GUI.