Servers for structure analysis: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
mNo edit summary |
||
| (5 intermediate revisions by 2 users not shown) | |||
| Line 1: | Line 1: | ||
== Analysis == | |||
== | |||
* [http://molprobity.biochem.duke.edu/ Molprobity] | * [http://molprobity.biochem.duke.edu/ Molprobity] | ||
* [http://scop.mrc-lmb.cam.ac.uk/scop/ SCOP] - Structural Classification of Proteins | |||
=== disulfides === | |||
== | * [http://caps.ncbs.res.in/dsdbase//dsdbase.html DSDBASE] - Database of disulfides in proteins | ||
* [http://www.ehscenter.org/dbd disulfide by design] - easy to install and to run. You put in a PDB file and the program will look in the structure where disulphide bonds are possible. It also ranks the candidates in energies. Finally, it can generate a PDB file with a particular disulphide. | |||
* [http:// | * [http://eagle.mmid.med.ualberta.ca/forms/ssbond.html SSBOND] - Bart Hazes' server; sourcecode available | ||
* [http://www. | |||
Latest revision as of 19:38, 29 May 2008
Analysis[edit | edit source]
- Molprobity
- SCOP - Structural Classification of Proteins
disulfides[edit | edit source]
- DSDBASE - Database of disulfides in proteins
- disulfide by design - easy to install and to run. You put in a PDB file and the program will look in the structure where disulphide bonds are possible. It also ranks the candidates in energies. Finally, it can generate a PDB file with a particular disulphide.
- SSBOND - Bart Hazes' server; sourcecode available