Servers for structure analysis

Analysis

• Molprobity
• SCOP - Structural Classification of Proteins

disulfides

• DSDBASE - Database of disulfides in proteins
• disulfide by design - easy to install and to run. You put in a PDB file and the program will look in the structure where disulphide bonds are possible. It also ranks the candidates in energies. Finally, it can generate a PDB file with a particular disulphide.
• SSBOND - Bart Hazes' server; sourcecode available