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Phenix: Difference between revisions
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The suite ([http://www.phenix-online.org/ Phenix home page]; [http://www.phenix-online.org/documentation documentation]) has a GUI program (phenix) which can be used to run the programs, but they also work from the command line. | The suite ([http://www.phenix-online.org/ Phenix home page]; [http://www.phenix-online.org/documentation documentation]) has a GUI program (phenix) which can be used to run the programs, but they also work from the command line. | ||
A short help, such as usage and options, is printed out by all PHENIX command line tools: just type phenix.TOOLNAME and hit Enter (or Return). | A short help, such as usage and options, is printed out by all PHENIX command line tools: just type phenix.TOOLNAME and hit Enter (or Return). Note that you can get a complete list of jiffies with | ||
phenix.list | |||
There is also version-specific documentation, e.g. http://www.phenix-online.org/version_docs/dev-572 documents development version 572. | There is also version-specific documentation, e.g. http://www.phenix-online.org/version_docs/dev-572 documents development version 572. | ||
The documentation below focuses on the non-GUI commandline tools and may not be complete, nor up-to-date or even correct. | The documentation below focuses on the non-GUI commandline tools and may not be complete, nor up-to-date or even correct. | ||