Bioinformatics

Sequence only

Sequence to structure

Structure to Sequence

Structure only

Docking

  • ClusPro - easy to use web interface
  • Rosetta can do much more than just docking, but is difficult to use
  • 3D-dock - uses an algorithm that mainly looks at surface complimentarity between the two proteins
  • Dave Ritchie's Hex program - it is blisteringly quick (somebody pls insert the link to it!)

Other stuff