Crystallography courses on the web: Difference between revisions
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# The book of Fourier (Kevin Cowtan): http://www.ysbl.york.ac.uk/~cowtan/fourier/fourier.html (Nice explanation of what is important in a Fourier calculation) | # The book of Fourier (Kevin Cowtan): http://www.ysbl.york.ac.uk/~cowtan/fourier/fourier.html (Nice explanation of what is important in a Fourier calculation) | ||
# The physical meaning of the phase in crystallography (Stanley C. Nyburg): http://www.ccp14.ac.uk/maths/nyburg/ (A Classic in Crystallographic Teaching) | # The physical meaning of the phase in crystallography (Stanley C. Nyburg): http://www.ccp14.ac.uk/maths/nyburg/ (A Classic in Crystallographic Teaching) | ||
# Crystallography 101 (Bernhard Rupp): http://ruppweb.dyndns.org/Xray/101index.html (Very good and nice introduction, some interactive parts) | # Crystallography 101 (Bernhard Rupp): http://ruppweb.dyndns.org/Xray/101index.html (Very good and nice introduction, some interactive parts) | ||
# Crystallographic Tutorials (Michael R. Sawaya): http://www.doe-mbi.ucla.edu/%7Esawaya/tutorials/tutorials.html (good for beginners, somewhat outdated when it comes to programs) | # Crystallographic Tutorials (Michael R. Sawaya): http://www.doe-mbi.ucla.edu/%7Esawaya/tutorials/tutorials.html (good for beginners, somewhat outdated when it comes to programs) | ||
# Basic Maths for Protein Crystallographers (Eleanor Dodson): http://www.ysbl.york.ac.uk/~mgwt/CCP4/EJD/bmg/index.html (If you want to work in protein crystallography, here are the math essentials) | # Basic Maths for Protein Crystallographers (Eleanor Dodson): http://www.ysbl.york.ac.uk/~mgwt/CCP4/EJD/bmg/index.html (If you want to work in protein crystallography, here are the math essentials) | ||
# The Molecular Level - Tools for Structural Biology Education and Training (Gale Rhodes): http:// | # The Molecular Level - Tools for Structural Biology Education and Training (Gale Rhodes): http://spdbv.vital-it.ch/TheMolecularLevel/index.html (from the author of "Crystallography Made Crystal Clear" - website includes a [http://spdbv.vital-it.ch/TheMolecularLevel/ModQual/index.html Glossary of Terms from Crystallography, NMR, and Homology Modeling]) | ||
# [http://www-structmed.cimr.cam.ac.uk/course.html Macromolecular Crystallography course at Cambridge Institute of Medical Research] - 6 basic lectures (available as HTML) and 17 advanced topics (10 of which are available as HTML) | |||
== Movies == | == Movies == | ||
# Crystallographic movies (James Holton): http://bl831.als.lbl.gov/~jamesh/movies/ (Very illustrative movies on the effects of resolution, R-factor data completeness etc. on the information content of the structure). | |||
* http://video.google.com/videoplay?docid=7084929825683486794&ei=M3b5SvXqD6em2AK3jY33CQ&q=Plongee+coeur+vivant# (in French) | # http://www.ruppweb.org/level1/movies_list.htm | ||
* http://cj.sauter.free.fr/xtal/Film/Xtal-biostructure_en.avi (same in English) | # 17 minutes about structural biology | ||
#*http://video.google.com/videoplay?docid=7084929825683486794&ei=M3b5SvXqD6em2AK3jY33CQ&q=Plongee+coeur+vivant# (in French) | |||
#* http://cj.sauter.free.fr/xtal/Film/Xtal-biostructure_en.avi (same in English) | |||
# MIT OpenCourseWare | |||
#* http://videolectures.net/mit3091f04_sadoway_lec14/ physics up to Boltzmann distribution | |||
#* ... | |||
#* http://videolectures.net/mit3091f04_sadoway_lec19/ | |||
# http://ocw.mit.edu/OcwWeb/Materials-Science-and-Engineering/3-60Fall-2005/CourseHome/ The instructor is Prof. Bernhardt Wuensch (materials science). | |||
== other == | |||
# what do the features in electron density maps mean? see Dale Tronrud's explanations at [http://www.ccp4.ac.uk/courses/stwk10/talk_files/Dale_The_Wonderful_World_of_Maps.pdf] | |||
Latest revision as of 13:53, 27 April 2017
- X-ray Crystallography in 5401 seconds (Manfred S. Weiss): http://www.embl-hamburg.de/~msweiss/teach (A very short and simple introduction)
- The book of Fourier (Kevin Cowtan): http://www.ysbl.york.ac.uk/~cowtan/fourier/fourier.html (Nice explanation of what is important in a Fourier calculation)
- The physical meaning of the phase in crystallography (Stanley C. Nyburg): http://www.ccp14.ac.uk/maths/nyburg/ (A Classic in Crystallographic Teaching)
- Crystallography 101 (Bernhard Rupp): http://ruppweb.dyndns.org/Xray/101index.html (Very good and nice introduction, some interactive parts)
- Crystallographic Tutorials (Michael R. Sawaya): http://www.doe-mbi.ucla.edu/%7Esawaya/tutorials/tutorials.html (good for beginners, somewhat outdated when it comes to programs)
- Basic Maths for Protein Crystallographers (Eleanor Dodson): http://www.ysbl.york.ac.uk/~mgwt/CCP4/EJD/bmg/index.html (If you want to work in protein crystallography, here are the math essentials)
- The Molecular Level - Tools for Structural Biology Education and Training (Gale Rhodes): http://spdbv.vital-it.ch/TheMolecularLevel/index.html (from the author of "Crystallography Made Crystal Clear" - website includes a Glossary of Terms from Crystallography, NMR, and Homology Modeling)
- Macromolecular Crystallography course at Cambridge Institute of Medical Research - 6 basic lectures (available as HTML) and 17 advanced topics (10 of which are available as HTML)
Movies[edit | edit source]
- Crystallographic movies (James Holton): http://bl831.als.lbl.gov/~jamesh/movies/ (Very illustrative movies on the effects of resolution, R-factor data completeness etc. on the information content of the structure).
- http://www.ruppweb.org/level1/movies_list.htm
- 17 minutes about structural biology
- MIT OpenCourseWare
- http://videolectures.net/mit3091f04_sadoway_lec14/ physics up to Boltzmann distribution
- ...
- http://videolectures.net/mit3091f04_sadoway_lec19/
- http://ocw.mit.edu/OcwWeb/Materials-Science-and-Engineering/3-60Fall-2005/CourseHome/ The instructor is Prof. Bernhardt Wuensch (materials science).
other[edit | edit source]
- what do the features in electron density maps mean? see Dale Tronrud's explanations at [1]