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Phenix: Difference between revisions
→phenix.automr - interface to Phaser and Resolve: add phenix.phaser
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This "wizard" provides an interface to Phaser molecular replacement and feeds the results of molecular replacement directly into the AutoBuild Wizard for automated model rebuilding | This "wizard" provides an interface to Phaser molecular replacement and feeds the results of molecular replacement directly into the AutoBuild Wizard for automated model rebuilding | ||
=== phenix.phaser === | |||
Not officially documented. It is run by the Phaser-MR GUI which supports the fine-tuning of parameters. | |||
If you run this: | |||
phenix.phaser params.eff | |||
it will use the Phenix-style configuration file, but if you just run | |||
"phenix.phaser" with no arguments (or a shell redirect from a file), | |||
it will use the CCP4-style keyword input. | |||
This is an [[params.eff|example]] of params.eff. | |||
=== [http://www.phenix-online.org/documentation/sculptor.htm phenix.sculptor] - automate selection and editing of molecular replacement (MR) models === | === [http://www.phenix-online.org/documentation/sculptor.htm phenix.sculptor] - automate selection and editing of molecular replacement (MR) models === | ||