Phenix: Difference between revisions

267 bytes added ,  8 September 2010
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=== phenix.model_vs_data - statistics ===
=== phenix.model_vs_data - statistics ===


not yet documented. Just use "phenix.model_vs_data model.pdb data.hkl" where data.hkl is a reflection file in most of known formats
not yet documented. Just use "phenix.model_vs_data model.pdb data.hkl" where data.hkl is a reflection file in most of known formats. phenix.model_vs_data can output the map defined as:
 
[p][m]Fo+[q][D]Fc[kick][filled].
 
Examples: 2mFo-DFc, 3.2Fo-2.3Fc, Fc, anom, fo-fc_kick.
 
So, if you say
 
phenix.model_vs_data model.pdb data.mtz --map=fc
 
you will get an MTZ file with desired structure factors.


=== [http://www.phenix-online.org/documentation/fmodel.htm phenix.fmodel] - calculate structure factors from model ===
=== [http://www.phenix-online.org/documentation/fmodel.htm phenix.fmodel] - calculate structure factors from model ===
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