Phenix: Difference between revisions

14 bytes added ,  27 September 2011
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As originally described in Acta Cryst. (1997). D53, 540-543 (in development). There is a [http://cci.lbl.gov/~afonine/tmp/grow_density.pdf PDF] file (or [http://phenix-online.org/pipermail/phenixbb/attachments/20110811/a73f1428/attachment.htm]) to explain some parameters of phenix.grow_density. It is very sketchy and may not be 100% up-to-date.
As originally described in Acta Cryst. (1997). D53, 540-543 (in development). There is a [http://cci.lbl.gov/~afonine/tmp/grow_density.pdf PDF] file (or [http://phenix-online.org/pipermail/phenixbb/attachments/20110811/a73f1428/attachment.htm]) to explain some parameters of phenix.grow_density. It is very sketchy and may not be 100% up-to-date.


Defining several spheres where the DA are going to be placed is better than defining one large sphere, although it depends on the  
Defining several spheres where the DA (dummy atoms) are going to be placed is better than defining one large sphere, although it depends on the  
region size and shape. For example:
region size and shape. For example:
  sphere {
  sphere {
1,330

edits