SHELX C/D/E: Difference between revisions

127 bytes removed ,  25 June 2015
(→‎Cubic space groups (PATS vs WEED): remove paragraph - WEED is no longer necessary in latest SHELXE)
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  -AX - maximum random initial rotation in deg. for -O [-A3.0]
  -AX - maximum random initial rotation in deg. for -O [-A3.0]
  -bX - B-value to weight anomalous map (xx.pha and xx.hat) [-b5.0]
  -bX - B-value to weight anomalous map (xx.pha and xx.hat) [-b5.0]
-B or -B1 - refine one B-value for complete trace [off]
-B2 - refine one B-value per traced chain [off]
-B3 - refine one B-value per traced residue [on]
  -cX - fraction of pixels in crossover region [-c0.4]
  -cX - fraction of pixels in crossover region [-c0.4]
  -dX - truncate reflection data to X Angstroms [off]
  -dX - truncate reflection data to X Angstroms [off]
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  -h or -hN - (N) heavy atoms also present in native structure [-h0]
  -h or -hN - (N) heavy atoms also present in native structure [-h0]
  -i  - invert space group and input (sub)structure or phases [off]
  -i  - invert space group and input (sub)structure or phases [off]
  -IN - in global cycle 1 only, do N cycles DM (free lunch if -e set) [off]
  -IN - in cycle 1 only, do N cycles DM (free lunch if -e) [off]
  -kX - minimum height/sigma for heavy atom sites in xx.hat [-k4.5]
  -kX - minimum height/sigma for heavy atom sites in xx.hat [-k4.5]
  -KN - keep starting fragment unchanged for N global cycles [off]
  -KN - keep starting fragment unchanged for N global cycles [off]
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  -x  - diagnostics, requires PDB reference file xx.ent [off]
  -x  - diagnostics, requires PDB reference file xx.ent [off]
  -yX - highest resol. in Ang. for calc. phases from xx.pda [-y1.8]
  -yX - highest resol. in Ang. for calc. phases from xx.pda [-y1.8]
-YX - SAD phase shift factor [-Y0.5]
  -zN - substructure optimization for a maximum of N atoms [off]
  -zN - substructure optimization for a maximum of N atoms [off]
  -z - subucture optimization, number of atoms not limited [off]
  -z - substructure optimization, number of atoms not limited [off]
  -ZX - maximum shift in Ang. from initial position for -O [-Z1.0]
  -ZX - maximum shift in Ang. from initial position for -O [-Z1.0]


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