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Servers and programs for sequence analysis: Difference between revisions
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→Disorder prediction: IUPRED
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:* [http://www.strubi.ox.ac.uk/RONN RONN (OPPF)] | :* [http://www.strubi.ox.ac.uk/RONN RONN (OPPF)] | ||
:* [http://www.bioinformatics.nl/~berndb/ronn.html RONN for multiple alignments] | :* [http://www.bioinformatics.nl/~berndb/ronn.html RONN for multiple alignments] | ||
:* [http://iupred.enzim.hu/ IUPRED] | |||
====Multiple Sequence Alignment==== | ====Multiple Sequence Alignment==== | ||
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:* [http://ca.expasy.org/tools/scanprosite/ PROSITE] Motif Scan and alignment | :* [http://ca.expasy.org/tools/scanprosite/ PROSITE] Motif Scan and alignment | ||
:* [http://www.bioinformatics.org/sms2/ident_sim.html SMS2] Calculate percentage sequence identity and similarity for aligned sequences | :* [http://www.bioinformatics.org/sms2/ident_sim.html SMS2] Calculate percentage sequence identity and similarity for aligned sequences | ||
====Other==== | |||
* [http://www.rostlab.org/services/CHOP CHOP] dissecting proteins into domain-like fragments based on sequence homology | |||