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'''All existing articles and links are blue, whereas all red links correspond to not yet existing articles!'''
'''This page is now obsolete since it was creating before too much of hierarchy structure. Use the Navigation Panel in the Side Bar instead.'''


== Expression and Purification ==
--[[User:3ND03P|3ND03P]] 09:40, 5 March 2008 (CET)
* [[Expression systems]]
* [[Purification]]
* [[Cleavage: wanted and unwanted]]
* [[DNA and DNA-binding proteins]]
* [[Expression and Purification: Tips and Tricks]]
 
== Crystals ==
 
=== Crystal growth and manipulation ===
* [[Crystallization screens and methods]]
* [[Robots for crystallization setup]]
* [[Visualization of crystal growth]]
* [[Robots for crystal mounting]]
* [[Crystal growth: Tips and Tricks]]
 
=== Data collection ===
* [[Synchrotron beamlines]]
* [[Cryo]]
* [[Strategies]]
* [[Data quality]]
 
== Crystallography ==
 
=== Theory ===
* [[Basics of Crystallography]]
* [[Phase problem]], and [[Phasing]]
* [[R-factors]]
* [[References and links]]
 
=== Programs ===
==== by package ====
(large packages first)
* [[CCP4]]
* [[CNS]]
* [[PHENIX]]
* [[SHELX C/D/E/L]] (homepage at [http://shelx.uni-ac.gwdg.de/SHELX])
* moleman, lsqman, ... from [http://xray.bmc.uu.se/usf/ Uppsala Software Factory]
* XDS [http://www.mpimf-heidelberg.mpg.de/~kabsch/xds homepage] and [http://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/XDS XDSwiki]
* HKL [http://www.hkl-xray.com homepage]
* ...
 
==== by task ====
* [[Data reduction]]
* [[Molecular replacement (MR)]]
* [[Experimental phasing (SIR/MIR and SAD/MAD)]]
* [[Model building and validation]]
* [[Refinement]]
 
=== Hardware: computing and sychrotrons ===
 
 
== Bioinformatics and computers ==
* [[Servers and programs for sequence analysis (e.g. alignment)]]
* [[Servers and programs for protein structure analysis]]
* [[Servers for ligand topologies/parameters]]
* [[Prediction of structure from sequence: servers and programs]]
* [[Visualization: programs, graphics cards and 3D]]
* [[Computer hardware]]
* [[Operating systems and Linux distributions]]
 
 
== FAQ and troubleshooting ==
* [[Protein expression|protein is not expressed]]
* [[Crystal growth: Tips and Tricks|crystals don't grow]]
* [[Model building and validation|phases too bad]]
* [[Refinement|model does not refine]]
Retrieved from "https://wiki.uni-konstanz.de/ccp4/index.php/Special:MobileDiff/74...469"
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