Topology plots: Difference between revisions

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Espript will produce nice Postscript plots from aligned sequences, highlighting secondary structure: http://espript.ibcp.fr . Roman Laskowski's program PDBSUM seems to fulfill a similar purpose.
Espript will produce nice Postscript plots from aligned sequences, highlighting secondary structure: http://espript.ibcp.fr . Roman Laskowski's program PDBSUM seems to fulfill a similar purpose.


Pro-origami: http://munk.csse.unimelb.edu.au/pro-origami/
Pro-origami: http://munk.csse.unimelb.edu.au/pro-origami/ - and see links on its website!


There is also a program called TOPS which I understand can be obtained from David Westhead's group in Leeds, email
TOPS: http://balabio.dcs.gla.ac.uk/tops/
D.R.Westhead@leeds.ac.uk


CCP4's [http://www.ccp4.ac.uk/html/topdraw.html Topdraw] is a drawing tool to help you make your own topology drawing.
CCP4's [http://www.ccp4.ac.uk/html/topdraw.html Topdraw] is a drawing tool to help you make your own topology drawing.

Revision as of 23:28, 12 March 2013

Espript will produce nice Postscript plots from aligned sequences, highlighting secondary structure: http://espript.ibcp.fr . Roman Laskowski's program PDBSUM seems to fulfill a similar purpose.

Pro-origami: http://munk.csse.unimelb.edu.au/pro-origami/ - and see links on its website!

TOPS: http://balabio.dcs.gla.ac.uk/tops/

CCP4's Topdraw is a drawing tool to help you make your own topology drawing.