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Generate XDS.INP: Difference between revisions
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put NX NY QX QY into XDS.INP
m (fix negative PHISTART) |
(put NX NY QX QY into XDS.INP) |
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# revision 0.10 . Tim Gruene 7/2010 - set link 'images' to image directory if path exceeds 72 characters | # revision 0.10 . Tim Gruene 7/2010 - set link 'images' to image directory if path exceeds 72 characters | ||
# revision 0.11 . KD 7/2010 - for MarCCD: look for distance info at different byte position | # revision 0.11 . KD 7/2010 - for MarCCD: look for distance info at different byte position | ||
# revision 0.12 . KD 7/2010 - fix for negative PHISTART | # revision 0.12 . KD 7/2010 - fix for negative PHISTART | ||
# revision 0.13 . KD 8/2010 - store correct NX NY QX QY in XDS.INP | |||
# | # | ||
# usage: e.g. generate_XDS.INP "frms/mydata_1_???.img" | # usage: e.g. generate_XDS.INP "frms/mydata_1_???.img" | ||
| Line 52: | Line 53: | ||
OSCILLATION_RANGE=XXX | OSCILLATION_RANGE=XXX | ||
X_RAY_WAVELENGTH=XXX | X_RAY_WAVELENGTH=XXX | ||
QX=XXX | |||
QY=XXX | |||
NX=XXX | |||
NY=XXX | |||
# see how we are called: | # see how we are called: | ||
| Line 178: | Line 183: | ||
NX=`grep SIZE1 tmp2 | tail -1 | sed s/SIZE1=//` | NX=`grep SIZE1 tmp2 | tail -1 | sed s/SIZE1=//` | ||
QX=`grep PIXEL_SIZE tmp2 | sed s/PIXEL_SIZE=//` | QX=`grep PIXEL_SIZE tmp2 | sed s/PIXEL_SIZE=//` | ||
# FIXME - next 2 lines should be done properly, from header | |||
NY=$NX | |||
QY=$QX | |||
BEAM_CENTER_X=`grep BEAM_CENTER_X tmp2 | sed s/BEAM_CENTER_X=//` | BEAM_CENTER_X=`grep BEAM_CENTER_X tmp2 | sed s/BEAM_CENTER_X=//` | ||
BEAM_CENTER_Y=`grep BEAM_CENTER_Y tmp2 | sed s/BEAM_CENTER_Y=//` | BEAM_CENTER_Y=`grep BEAM_CENTER_Y tmp2 | sed s/BEAM_CENTER_Y=//` | ||
| Line 200: | Line 208: | ||
elif [ "$DET" == "pilatus" ]; then | elif [ "$DET" == "pilatus" ]; then | ||
DETECTOR="PILATUS MINIMUM_VALID_PIXEL_VALUE=0 OVERLOAD= 1048576 QX=0.172 QY=0.172 !PILATUS 6M" | DETECTOR="PILATUS MINIMUM_VALID_PIXEL_VALUE=0 OVERLOAD= 1048576 QX=0.172 QY=0.172 !PILATUS 6M" | ||
NX=2463 NY=2527 QX=0.172 QY=0.172 | |||
echo this is a Pilatus detector | echo this is a Pilatus detector | ||
head -50 `head -1 tmp1` | sed s/#//> tmp2 | head -50 `head -1 tmp1` | sed s/#//> tmp2 | ||
| Line 267: | Line 276: | ||
! parameters specifically for this detector and beamline: | ! parameters specifically for this detector and beamline: | ||
DETECTOR= $DETECTOR | DETECTOR= $DETECTOR | ||
!NX= | !NX= $NX NY= $NY QX= $QX QY= $QY ! XDS finds this out by itself (not for Pilatus) | ||
DIRECTION_OF_DETECTOR_X-AXIS=1 0 0 | DIRECTION_OF_DETECTOR_X-AXIS=1 0 0 | ||
DIRECTION_OF_DETECTOR_Y-AXIS=0 1 0 | DIRECTION_OF_DETECTOR_Y-AXIS=0 1 0 | ||
| Line 278: | Line 287: | ||
echo After running xds, inspect at least BKGPIX.cbf and FRAME.cbf with XDS-Viewer! | echo After running xds, inspect at least BKGPIX.cbf and FRAME.cbf with XDS-Viewer! | ||
rm -f tmp1 tmp2 | rm -f tmp1 tmp2 | ||
</pre> | </pre> | ||