XDS.INP: Difference between revisions

Jump to navigation Jump to search
187 bytes added ,  26 July 2011
Line 49: Line 49:
== Keywords for space group assignment ==
== Keywords for space group assignment ==


A dataset can be reduced by XDS in space group P1. If you know the space group and unit cell parameters of your crystal in advance you just need these two keywords:
A dataset with unknown space group can be reduced by XDS in space group P1. The decision about the possible space group(s) is then deferred until the CORRECT step. If you know the space group and unit cell parameters of your crystal you just need these two keywords:
;[http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xds_parameters.html#SPACE_GROUP_NUMBER= SPACE_GROUP_NUMBER]
;[http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xds_parameters.html#SPACE_GROUP_NUMBER= SPACE_GROUP_NUMBER]
:If you don't know the space group, put a 0 or comment out the line. The space group will then [[Space_group_determination|be automatically determined]] in the CORRECT step. A mapping of space group names against their numbers is near the end of [[IDXREF.LP]].
:If you don't know the space group, put a 0 or comment out the line. The space group will then [[Space_group_determination|be automatically determined]] in the CORRECT step. A mapping of space group names against their numbers is available from [[IDXREF.LP]] and [[CORRECT.LP]].


;[http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xds_parameters.html#UNIT_CELL_PARAMETERS= UNIT_CELL_PARAMETERS]
;[http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xds_parameters.html#UNIT_CELL_PARAMETERS= UNIT_CELL_PARAMETERS]
:If you don't know the space group, put six 0s or comment out the line. Unit cell parameters need to respect the constraints of the Laue group, e.g. all angles must be exactly 90.0 for orthorhombic and tetragonal space groups, a and b must be equal for trigonal and tetragonal, and so on.
:If you don't know the space group, put six 0s or comment out the line. Unit cell parameters need to respect the constraints of the Laue group, e.g. all angles must be exactly 90.0 for orthorhombic and tetragonal space groups, a and b must be equal for trigonal and tetragonal, and so on.


If you want to assign a space group and unit cell parameters to a dataset that was reduced in P1, you just have to put that space group and those unit cell parameters in to [[XDS.INP]], and re-run [[CORRECT]].
If you want to assign a space group and unit cell parameters to a dataset that was reduced in P1, you just have to put that space group and those unit cell parameters into [[XDS.INP]], and re-run [[CORRECT]].
 
If the space group is given as 0, the file REMOVE.HKL is not used.


== Keywords which affect completeness and resolution limits  ==
== Keywords which affect completeness and resolution limits  ==
2,684

edits

Cookies help us deliver our services. By using our services, you agree to our use of cookies.

Navigation menu