ACA2014 - Revision history

Karsten at 13:19, 24 March 2020

2020-03-24T13:19:27Z

← Older revision		Revision as of 15:19, 24 March 2020
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	The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [~~ftp~~://{{SERVERNAME}}/pub/XDS_Yamashita_ACA2014.pdf downloaded].		The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [https://{{SERVERNAME}}/pub/XDS_Yamashita_ACA2014.pdf downloaded].

	Data and descriptions are also [http://bl831.als.lbl.gov/example_data_sets/ACA2011/DPWTPreloaded/index.html here] (this has ACA2011 in the name but it really refers to ACA2014).		Data and descriptions are also [http://bl831.als.lbl.gov/example_data_sets/ACA2011/DPWTPreloaded/index.html here] (this has ACA2011 in the name but it really refers to ACA2014).
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	== Thaumatin ==		== Thaumatin ==

	1800 frames collected on a Pilatus 6M detector at APS 24-ID-C; data at [~~ftp~~://{{SERVERNAME}}/pub/datasets/ACA2014_thaumatin/]. What is special about these data:		1800 frames collected on a Pilatus 6M detector at APS 24-ID-C; data at [https://{{SERVERNAME}}/pub/datasets/ACA2014_thaumatin/]. What is special about these data:
	* tiny spots (1-2 pixel)		* tiny spots (1-2 pixel)
	* shutterless and fast		* shutterless and fast
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	226 frames collected on a MarCCD 300 detector at BL XXX. What is special about these data:		226 frames collected on a MarCCD 300 detector at BL XXX. What is special about these data:
	* hard-to-identify space group		* hard-to-identify space group
	The XDS data processing is documented at [[Trypsin_inhibitor_ACA2014]]. Data are at [~~ftp~~://{{SERVERNAME}}/pub/datasets/ACA2014_Trypsin_with_inhibitor/].		The XDS data processing is documented at [[Trypsin_inhibitor_ACA2014]]. Data are at [https://{{SERVERNAME}}/pub/datasets/ACA2014_Trypsin_with_inhibitor/].

	== "Tough Spots" ==		== "Tough Spots" ==

	Frames collected on an ADSC Q315 CCD detector at BL XXX. Only 10 frames are available [~~ftp~~://{{SERVERNAME}}/pub/datasets/ACA2014_tough_spots/]. What is special about these data:		Frames collected on an ADSC Q315 CCD detector at BL XXX. Only 10 frames are available [https://{{SERVERNAME}}/pub/datasets/ACA2014_tough_spots/]. What is special about these data:
	* streaks rather than "spots"		* streaks rather than "spots"
	The XDS data processing is documented at [[Tough_Spots_ACA2014]].		The XDS data processing is documented at [[Tough_Spots_ACA2014]].
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	450 frames collected on an ADSC Q315 CCD detector at SSRL BL 11-1. What is special about these data: at the time, it was not clear what the space group was, and whether there was twinning.		450 frames collected on an ADSC Q315 CCD detector at SSRL BL 11-1. What is special about these data: at the time, it was not clear what the space group was, and whether there was twinning.

	The data frames are at ~~ftp~~://{{SERVERNAME}}/pub/datasets/ACA2014_hard_spacegroup/		The data frames are at https://{{SERVERNAME}}/pub/datasets/ACA2014_hard_spacegroup/

	The XDS data processing is (not yet) documented at [[CagL_ACA2014]]. There was no twinning, and the space group was P6522. The resulting structure was deposited as [https://www.rcsb.org/structure/4X5U 4X5U], and published in [http://www.jbc.org/content/290/20/12929.full JBC].		The XDS data processing is (not yet) documented at [[CagL_ACA2014]]. There was no twinning, and the space group was P6522. The resulting structure was deposited as [https://www.rcsb.org/structure/4X5U 4X5U], and published in [http://www.jbc.org/content/290/20/12929.full JBC].

Karsten at 16:20, 19 December 2019

2019-12-19T16:20:52Z

← Older revision		Revision as of 18:20, 19 December 2019
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	The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [ftp://~~turn5.biologie.uni-konstanz.de~~/pub/XDS_Yamashita_ACA2014.pdf downloaded].		The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [ftp://{{SERVERNAME}}/pub/XDS_Yamashita_ACA2014.pdf downloaded].

	Data and descriptions are also [http://bl831.als.lbl.gov/example_data_sets/ACA2011/DPWTPreloaded/index.html here] (this has ACA2011 in the name but it really refers to ACA2014).		Data and descriptions are also [http://bl831.als.lbl.gov/example_data_sets/ACA2011/DPWTPreloaded/index.html here] (this has ACA2011 in the name but it really refers to ACA2014).
Line 5:		Line 5:
	== Thaumatin ==		== Thaumatin ==

	1800 frames collected on a Pilatus 6M detector at APS 24-ID-C; data at [ftp://~~turn5.biologie.uni-konstanz.de~~/pub/datasets/ACA2014_thaumatin/]. What is special about these data:		1800 frames collected on a Pilatus 6M detector at APS 24-ID-C; data at [ftp://{{SERVERNAME}}/pub/datasets/ACA2014_thaumatin/]. What is special about these data:
	* tiny spots (1-2 pixel)		* tiny spots (1-2 pixel)
	* shutterless and fast		* shutterless and fast
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	226 frames collected on a MarCCD 300 detector at BL XXX. What is special about these data:		226 frames collected on a MarCCD 300 detector at BL XXX. What is special about these data:
	* hard-to-identify space group		* hard-to-identify space group
	The XDS data processing is documented at [[Trypsin_inhibitor_ACA2014]]. Data are at [ftp://~~turn5.biologie.uni-konstanz.de~~/pub/datasets/ACA2014_Trypsin_with_inhibitor/].		The XDS data processing is documented at [[Trypsin_inhibitor_ACA2014]]. Data are at [ftp://{{SERVERNAME}}/pub/datasets/ACA2014_Trypsin_with_inhibitor/].

	== "Tough Spots" ==		== "Tough Spots" ==

	Frames collected on an ADSC Q315 CCD detector at BL XXX. Only 10 frames are available [ftp://~~turn5.biologie.uni-konstanz.de~~/pub/datasets/ACA2014_tough_spots/]. What is special about these data:		Frames collected on an ADSC Q315 CCD detector at BL XXX. Only 10 frames are available [ftp://{{SERVERNAME}}/pub/datasets/ACA2014_tough_spots/]. What is special about these data:
	* streaks rather than "spots"		* streaks rather than "spots"
	The XDS data processing is documented at [[Tough_Spots_ACA2014]].		The XDS data processing is documented at [[Tough_Spots_ACA2014]].
Line 34:		Line 34:
	450 frames collected on an ADSC Q315 CCD detector at SSRL BL 11-1. What is special about these data: at the time, it was not clear what the space group was, and whether there was twinning.		450 frames collected on an ADSC Q315 CCD detector at SSRL BL 11-1. What is special about these data: at the time, it was not clear what the space group was, and whether there was twinning.

	The data frames are at ftp://~~turn5.biologie.uni-konstanz.de~~/pub/datasets/ACA2014_hard_spacegroup/		The data frames are at ftp://{{SERVERNAME}}/pub/datasets/ACA2014_hard_spacegroup/

	The XDS data processing is (not yet) documented at [[CagL_ACA2014]]. There was no twinning, and the space group was P6522. The resulting structure was deposited as [https://www.rcsb.org/structure/4X5U 4X5U], and published in [http://www.jbc.org/content/290/20/12929.full JBC].		The XDS data processing is (not yet) documented at [[CagL_ACA2014]]. There was no twinning, and the space group was P6522. The resulting structure was deposited as [https://www.rcsb.org/structure/4X5U 4X5U], and published in [http://www.jbc.org/content/290/20/12929.full JBC].

Kay: /* CagL */

2019-05-02T18:33:31Z

CagL

← Older revision		Revision as of 20:33, 2 May 2019
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	== CagL ==		== CagL ==

	450 frames collected on an ADSC Q315 CCD detector at BL ~~XXX~~. What is special about these data:		450 frames collected on an ADSC Q315 CCD detector at SSRL BL 11-1. What is special about these data: at the time, it was not clear what the space group was, and whether there was twinning.
	*
	~~The XDS data processing is documented~~ at ~~[[CagL_ACA2014]]~~.		The data frames are at ftp://turn5.biologie.uni-konstanz.de/pub/datasets/ACA2014_hard_spacegroup/
	The data are at ftp://turn5.biologie.uni-konstanz.de/pub/datasets/ACA2014_hard_spacegroup/
			The XDS data processing is (not yet) documented at [[CagL_ACA2014]]. There was no twinning, and the space group was P6522. The resulting structure was deposited as [https://www.rcsb.org/structure/4X5U 4X5U], and published in [http://www.jbc.org/content/290/20/12929.full JBC].

Kay: /* CagL */ make data available

2019-05-02T18:09:53Z

CagL: make data available

← Older revision		Revision as of 20:09, 2 May 2019
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	*		*
	The XDS data processing is documented at [[CagL_ACA2014]].		The XDS data processing is documented at [[CagL_ACA2014]].
			The data are at ftp://turn5.biologie.uni-konstanz.de/pub/datasets/ACA2014_hard_spacegroup/

Kay: link to Trypsin data

2016-07-28T12:07:30Z

link to Trypsin data

← Older revision		Revision as of 14:07, 28 July 2016
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	The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [ftp://turn5.biologie.uni-konstanz.de/pub/XDS_Yamashita_ACA2014.pdf downloaded].		The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [ftp://turn5.biologie.uni-konstanz.de/pub/XDS_Yamashita_ACA2014.pdf downloaded].

	Data and descriptions are also [http://bl831.als.lbl.gov/example_data_sets/ACA2011/DPWTPreloaded/~~trypsin_S-SAD~~.html here] (this has ACA2011 in the name but it really refers to ACA2014).		Data and descriptions are also [http://bl831.als.lbl.gov/example_data_sets/ACA2011/DPWTPreloaded/index.html here] (this has ACA2011 in the name but it really refers to ACA2014).

	== Thaumatin ==		== Thaumatin ==
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	== Trypsin ==		== Trypsin ==

	7200 frames collected (and 3600 frames provided) on a Pilatus 2M detector at BL-1A, PF. What is special about these data:		7200 frames collected (and 3600 frames provided) on a Pilatus 2M detector at BL-1A, PF. Data are [http://bl831.als.lbl.gov/example_data_sets/ACA2011/DPWTPreloaded/trypsin_S-SAD.html here]. What is special about these data:
	* shutterless and fast		* shutterless and fast
	* low energy (2.7 A wavelength)		* low energy (2.7 A wavelength)

Kay: link to James Holton's page

2016-07-28T12:05:38Z

link to James Holton's page

← Older revision		Revision as of 14:05, 28 July 2016
Line 1:		Line 1:
	The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [ftp://turn5.biologie.uni-konstanz.de/pub/XDS_Yamashita_ACA2014.pdf downloaded].		The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [ftp://turn5.biologie.uni-konstanz.de/pub/XDS_Yamashita_ACA2014.pdf downloaded].

			Data and descriptions are also [http://bl831.als.lbl.gov/example_data_sets/ACA2011/DPWTPreloaded/trypsin_S-SAD.html here] (this has ACA2011 in the name but it really refers to ACA2014).

	== Thaumatin ==		== Thaumatin ==

Kay: /* Thaumatin */

2016-07-28T11:54:07Z

Thaumatin

← Older revision		Revision as of 13:54, 28 July 2016
Line 3:		Line 3:
	== Thaumatin ==		== Thaumatin ==

	1800 frames collected on a Pilatus 6M detector at APS 24-ID-C. What is special about these data:		1800 frames collected on a Pilatus 6M detector at APS 24-ID-C; data at [ftp://turn5.biologie.uni-konstanz.de/pub/datasets/ACA2014_thaumatin/]. What is special about these data:
	* tiny spots (1-2 pixel)		* tiny spots (1-2 pixel)
	* shutterless and fast		* shutterless and fast

Kay: /* Trypsin with a tight-binding protein inhibitor */

2016-07-28T11:33:55Z

Trypsin with a tight-binding protein inhibitor

← Older revision		Revision as of 13:33, 28 July 2016
Line 20:		Line 20:
	226 frames collected on a MarCCD 300 detector at BL XXX. What is special about these data:		226 frames collected on a MarCCD 300 detector at BL XXX. What is special about these data:
	* hard-to-identify space group		* hard-to-identify space group
	The XDS data processing is documented at [[Trypsin_inhibitor_ACA2014]].		The XDS data processing is documented at [[Trypsin_inhibitor_ACA2014]]. Data are at [ftp://turn5.biologie.uni-konstanz.de/pub/datasets/ACA2014_Trypsin_with_inhibitor/].

	== "Tough Spots" ==		== "Tough Spots" ==

Kay: /* "Tough Spots" */ add link to raw data

2016-07-28T11:32:07Z

"Tough Spots": add link to raw data

← Older revision		Revision as of 13:32, 28 July 2016
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	== "Tough Spots" ==		== "Tough Spots" ==

	Frames collected on an ADSC Q315 CCD detector at BL XXX. Only 10 frames are available. What is special about these data:		Frames collected on an ADSC Q315 CCD detector at BL XXX. Only 10 frames are available [ftp://turn5.biologie.uni-konstanz.de/pub/datasets/ACA2014_tough_spots/]. What is special about these data:
	* streaks rather than "spots"		* streaks rather than "spots"
	The XDS data processing is documented at [[Tough_Spots_ACA2014]].		The XDS data processing is documented at [[Tough_Spots_ACA2014]].


	== CagL ==		== CagL ==

Keitaro: PDF URL changed

2014-05-28T08:53:11Z

PDF URL changed

← Older revision		Revision as of 10:53, 28 May 2014
Line 1:		Line 1:
	The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [ftp://turn5.biologie.uni-konstanz.de/pub/~~140525_aca2014_xds_slide_forwiki~~.pdf downloaded].		The following datasets were used at the "Data processing with the Pros" session of the [http://www.amercrystalassn.org/app/session/100172 ACA2014]. Keitaro Yamashita's talk about XDS processing may be [ftp://turn5.biologie.uni-konstanz.de/pub/XDS_Yamashita_ACA2014.pdf downloaded].

	== Thaumatin ==		== Thaumatin ==