XDS-Viewer: Difference between revisions

844 bytes removed ,  29 June 2012
no edit summary
No edit summary
No edit summary
Line 1: Line 1:
XDS-viewer is a open source program that was written by Michael Hoffer (Kabsch lab). It replaces the now obsolete [[VIEW]] program, and is available from http://xds-viewer.sourceforge.net/ .
XDS-viewer is a open source program that was written by Michael Hoffer (Kabsch lab). It replaces the now obsolete [[VIEW]] program, and is available from http://xds-viewer.sourceforge.net/ .


I was able to compile the program (version 0.5) for RedHat Enterprise Linux versions 3, 4 and 5 (or rather, for their CentOS equivalents) by the following recipe:
I was able to compile the program (version 0.6) for RedHat Enterprise Linux version 6 (or rather, for its CentOS equivalents) by the following recipe:


  # the X11 development libs are needed; in case they are not available use something like:
  wget http://downloads.sourceforge.net/xds-viewer/xds-viewer-0.6.tar.gz
# yum install libX11-devel libXext-devel
  tar xf xds-viewer-0.6.tar.gz
# also check out http://doc.trolltech.com/4.5/requirements-x11.html !
  cd xds-viewer-0.6
  sh compile.sh  
wget http://download.qtsoftware.com/qt/source/qt-x11-opensource-src-4.5.0.tar.gz
  # If this complains about missing tools or libraries, use e.g. "yum search cmake"
  # unpack the tarfile and run "./configure -static"; then "gmake -j <number of processes>".
  # I had to "yum install cmake qt-devel"
  # Warning: this takes hours and up to 10 GB disk space!
# It may be possible to add e.g. the -no-qt3support -no-exceptions options but I didn't try.
wget http://www.cmake.org/files/v2.6/cmake-2.6.3-Linux-i386.sh
# unpack and note where the bin directory is
  wget http://downloads.sourceforge.net/xds-viewer/xds-viewer-0.5.tar.gz
  # unpack, then edit compile.sh and add a line like
  # PATH=<path to cmake bin directory>:/usr/local/Trolltech/Qt-4.5.0/bin:$PATH
sh compile.sh # this gives the binary in the build/bin directory


I worked out the following patch to make the x and y values fit into the upper right window:
I worked out the following patch to make the x and y values fit into the upper right window:
Line 36: Line 25:


The resulting binaries are available at ftp://turn5.biologie.uni-konstanz.de/pub .
The resulting binaries are available at ftp://turn5.biologie.uni-konstanz.de/pub .
Update Dec 21, 2009: XDS-viewer is at version 0.6 but the changes are minor, they affect only the installation script. The above still applies. Cmake is at version 2.8.0 now.


==Gentoo Linux==
==Gentoo Linux==
2,684

edits