XDS-Viewer: Difference between revisions

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XDS-viewer is a open source program that was written by Michael Hoffer (Kabsch lab).
XDS-viewer is a open source program that was written by Michael Hoffer (Kabsch lab). It replaces the now obsolete [[VIEW]] program, and is available from http://xds-viewer.sourceforge.net/ .


I was able to compile the program (version 0.5) for RedHat Enterprise Linux versions 3, 4 and 5 (or rather, for their CentOS equivalents) by the following recipe:
Source code adapted to Qt5 is available as [https://{{SERVERNAME}}/pub/xds-viewer-0.7.tar.gz] (Thomas Hauß, HZB).


# the X11 development libs are needed; in case they are not available use something like:
To compile the program, use the following recipe:
# yum install libX11-devel libXext-devel
# also check out http://doc.trolltech.com/4.5/requirements-x11.html !
wget http://download.qtsoftware.com/qt/source/qt-x11-opensource-src-4.5.0.tar.gz
# unpack the tarfile and run "./configure -static"; then "gmake -j <number of processes>".
# Warning: this takes hours and up to 10 GB disk space!
# It may be possible to add e.g. the -no-qt3support -no-exceptions options but I didn't try.
wget http://www.cmake.org/files/v2.6/cmake-2.6.3-Linux-i386.sh
# unpack and note where the bin directory is
wget http://downloads.sourceforge.net/xds-viewer/xds-viewer-0.5.tar.gz
# unpack, then edit compile.sh and add a line like
# PATH=<path to cmake bin directory>:/usr/local/Trolltech/Qt-4.5.0/bin:$PATH
compile.sh  # this gives the binary in the build/bin directory


I worked out the following patch to make the x and y values fit into the upper right window:
wget http://downloads.sourceforge.net/xds-viewer/xds-viewer-0.6.tar.gz
tar xf xds-viewer-0.6.tar.gz
cd xds-viewer-0.6
sh compile.sh
# If this complains about missing tools or libraries, use e.g. "yum search cmake"
# I had to "yum install cmake qt-devel"
# on CentOS6 I had to install and use cmake3 instead of cmake
# installation of the 0.7 version works in the same way
 
The following patch makes the x and y values fit into the upper right window:


  --- xds-viewer-old/src/mainwindow.ui    2009-03-08 15:00:55.000000000 +0100
  --- xds-viewer-old/src/mainwindow.ui    2009-03-08 15:00:55.000000000 +0100
Line 35: Line 28:
               <strikeout>false</strikeout>
               <strikeout>false</strikeout>


The resulting binaries are available at ftp://turn5.biologie.uni-konstanz.de/pub .
Linux binaries are available at https://{{SERVERNAME}}/pub/linux_bin . The default one is a [https://{{SERVERNAME}}/pub/linux_bin/XDS-viewer Qt5 binary] (a Qt4 binary is available as XDS-viewer.qt4).


A Qt5 binary for MacOS [https://{{SERVERNAME}}/pub/mac_bin/XDS-Viewer-macOS10.13.dmg 10.13], and one for [https://{{SERVERNAME}}/pub/mac_bin/XDS-Viewer-macOS10.15.dmg 10.15] and newer was made available by Thomas Hauß (HZB). Mac users must decide which one is appropriate.


==Gentoo Linux==
==Binaries at the sourceforge site==
[https://sourceforge.net/project/platformdownload.php?group_id=239755 These binaries] are really old.


You can find the ebuild in the science overlay.
==See also==


emerge sci-visualization/xds-viewer
[[Installation]]
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