Problems: Difference between revisions
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== Indexing failures == | == Indexing failures == | ||
In case of IDXREF problems, you should definitively inspect, using [[XDS-viewer]] or [[adxv]], the | In case of IDXREF problems, you should definitively inspect, using [[XDS-viewer]] or [[adxv]], the [https://xds.mr.mpg.de/html_doc/xds_files.html#SHOW_SPOT.cbf SHOW_SPOT.cbf] file which is written by COLSPOT. This file shows the first frame (can be changed by [https://xds.mr.mpg.de/html_doc/xds_parameters.html#SHOW_IMAGE_NUMBER= SHOW_IMAGE_NUMBER=]) of the [https://xds.mr.mpg.de/html_doc/xds_parameters.html#SPOT_RANGE= SPOT_RANGE], together with strong pixels that COLSPOT found on this frame, marked with white pixels. IDXREF will use those spot positions which have at least as many strong pixels as [https://xds.mr.mpg.de/html_doc/xds_parameters.html#MINIMUM_NUMBER_OF_PIXELS_IN_A_SPOT= MINIMUM_NUMBER_OF_PIXELS_IN_A_SPOT] specifies. | ||
You will only be able to look at this file if you prevent XDS from running INTEGRATE. This can be achieved e.g. by | You will only be able to look at this file if you prevent XDS from running INTEGRATE. This can be achieved e.g. by | ||