Xdscc12: Difference between revisions
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== Explanation of output == | == Explanation of output == | ||
The program output in the terminal window is terse but supposed to be self-explanatory; it can (and most often should) be saved or re-directed to a file. | The program output in the terminal window is terse but supposed to be self-explanatory; it can (and most often should) be saved or re-directed to a file. | ||
xdscc12 | xdscc12 FILE_FROM_XSCALE > xdscc12.log # or xdscc12 FILE_FROM_XSCALE | tee xdscc12.log | ||
All statistics (tables) produced by XDSCC12 may be visualized with e.g. gnuplot, after grepping the relevant lines from the output. | All statistics (tables) produced by XDSCC12 may be visualized with e.g. gnuplot, after grepping the relevant lines from the output. | ||
If XDSCC12 is used with a XDS_ASCII.HKL reflection file (from XDS), the isomorphous delta-CC<sub>1/2</sub> of a batch of frames (width chosen with the <code>-t</code> option; typically <code>-t 1</code>) relative to all data is most easily visualized via [[XDSGUI]] (Statistics tab). Negative numbers indicate a worsening of the overall signal. | If XDSCC12 is used with a XDS_ASCII.HKL reflection file (from XDS), the isomorphous delta-CC<sub>1/2</sub> of a batch of frames (width chosen with the <code>-t</code> option; typically <code>-t 1</code>) relative to all data is most easily visualized via [[XDSGUI]] (Statistics tab). Negative numbers indicate a worsening of the overall signal. | ||
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quit | quit | ||
</pre> | </pre> | ||
For a Refmac-written MTZ file, you would use "col FC_ALL" instead of "col F-model". | |||
=== Reference data with anomalous signal (additional -s option) === | === Reference data with anomalous signal (additional -s option) === | ||