Cheat sheet: Difference between revisions
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!<big>XDS/XDSGUI processing workflow</big>. The links given like e.g. [[XDSGUI#Frame]] | !<big>XDS/XDSGUI processing workflow</big>. The links given like | ||
refer to | e.g. [[XDSGUI#Frame]] refer to XDSwiki (https://wiki.uni-konstanz.de/xds/index.php/) | ||
!The programs must have been properly installed - see [[Installation]]. Troubleshooting hints are at [[Problems]]. | !The programs must have been properly installed - see [[Installation]]. Troubleshooting hints are at [[Problems]]. | ||
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!why? what to look out for? what else to know? | !why? what to look out for? what else to know? | ||
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| | |<small>'''1.''' '''Set up environment.''' Open a terminal and position it on the left side of your screen. Keeping the terminal window to the left of the XDSGUI window makes it possible to see e.g. error messages from XDSGUI, or the <code>pointless</code> output.</small> <small>Type <code>xdsgui</code> and move its window so that you still see the left half of the terminal window.</small> <small>Optional: before typing <code>xdsgui</code> ,<code>cd</code> to an existing XDS processing directory, or create a new (empty) directory:<code>cd <toplevel-directory></code>; <code>mkdir <xds-directory>; cd <xds-directory></code></small> | ||
<small>'''1.''' '''Set up environment.''' Open a terminal and position it on the left side of your screen. Keeping the terminal window to the left of the XDSGUI window makes it possible to see e.g. error messages from XDSGUI, or the <code>pointless</code> output.</small> | |||
<small>Type <code>xdsgui</code> and move its window so that you still see the left half of the terminal window.</small> | |||
<small>Optional: before typing <code>xdsgui</code> ,<code>cd</code> to an existing XDS processing directory, or create a new (empty) directory:<code>cd <toplevel-directory></code>; <code>mkdir <xds-directory>; cd <xds-directory></code></small> | |||
|<small>If you work with HDF5 data: <code>export NEGGIA_PATH= /usr/local/lib64/dectris-neggia.so</code>. (For HDF5 data from Diamond, use <code>export DURIN_PATH= /usr/local/lib64/durin-plugin.so</code> instead). The path must match YOUR computer; the given one is just an example. The path must appear in "Generic frame library" under <code>xdsgui / Preferences ../ Paths</code> on macOS, or <code>Menu / Settings / Paths</code> on Linux, and should appear after LIB= in <code>XDS.INP</code>.</small> | |<small>If you work with HDF5 data: <code>export NEGGIA_PATH= /usr/local/lib64/dectris-neggia.so</code>. (For HDF5 data from Diamond, use <code>export DURIN_PATH= /usr/local/lib64/durin-plugin.so</code> instead). The path must match YOUR computer; the given one is just an example. The path must appear in "Generic frame library" under <code>xdsgui / Preferences ../ Paths</code> on macOS, or <code>Menu / Settings / Paths</code> on Linux, and should appear after LIB= in <code>XDS.INP</code>.</small> | ||
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