MCS2016: Difference between revisions
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NAME_TEMPLATE_OF_DATA_FRAMES= /home/mx2016/MX-tutorials/DIALS-data/x247398/t1.????.img | NAME_TEMPLATE_OF_DATA_FRAMES= /home/mx2016/MX-tutorials/DIALS-data/x247398/t1.????.img | ||
</pre> | </pre> | ||
What generate_XDS.INP produces differs from the above by the sign of the ROTATION_AXIS . This is a rather typical problem scenario: sometimes the beamline people make the spindle rotate the wrong (or at least uncommon) way. Since the headers of the frames do not have this information (which we try to collect in the [[Beamline notes]] article), the user has to try the other possibility, by manually editing XDS.INP (e.g. in the XDSGUI tab). |
Revision as of 21:38, 4 April 2016
some notes concerning the datasets :
the datasets in the DIALS-data directory can be downloaded from:
https://zenodo.org/record/10271 https://zenodo.org/record/45756
Please note that generate_XDS.INP does not currently produce a working XDS.INP for the second of these!
As noted at https://zenodo.org/record/45756 , XDS.INP should be
! XDS.INP from https://zenodo.org/record/45756 DETECTOR=ADSC MINIMUM_VALID_PIXEL_VALUE=1 OVERLOAD= 65000 DIRECTION_OF_DETECTOR_X-AXIS= 1.0 0.0 0.0 DIRECTION_OF_DETECTOR_Y-AXIS= 0.0 1.0 0.0 TRUSTED_REGION=0.0 1.05 ORGX= 1582.82 ORGY= 1485.54 DETECTOR_DISTANCE= 150 ROTATION_AXIS= -1.0 0.0 0.0 OSCILLATION_RANGE=1 X-RAY_WAVELENGTH= 1.2821511 INCIDENT_BEAM_DIRECTION=0.0 0.0 1.0 FRACTION_OF_POLARIZATION=0.90 POLARIZATION_PLANE_NORMAL= 0.0 1.0 0.0 SPACE_GROUP_NUMBER=20 UNIT_CELL_CONSTANTS= 100.030 121.697 56.554 90.000 90.000 90.000 DATA_RANGE=1 180 ! actually there are 200 BACKGROUND_RANGE=1 6 SPOT_RANGE=1 3 SPOT_RANGE=31 33 MAX_CELL_AXIS_ERROR=0.03 MAX_CELL_ANGLE_ERROR=2.0 TEST_RESOLUTION_RANGE=8.0 3.8 MIN_RFL_Rmeas= 50 MAX_FAC_Rmeas=2.0 VALUE_RANGE_FOR_TRUSTED_DETECTOR_PIXELS= 6000 30000 INCLUDE_RESOLUTION_RANGE=50.0 1.7 FRIEDEL'S_LAW= FALSE STARTING_ANGLE= -100 STARTING_FRAME=1 NAME_TEMPLATE_OF_DATA_FRAMES= /home/mx2016/MX-tutorials/DIALS-data/x247398/t1.????.img
What generate_XDS.INP produces differs from the above by the sign of the ROTATION_AXIS . This is a rather typical problem scenario: sometimes the beamline people make the spindle rotate the wrong (or at least uncommon) way. Since the headers of the frames do not have this information (which we try to collect in the Beamline notes article), the user has to try the other possibility, by manually editing XDS.INP (e.g. in the XDSGUI tab).