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CC1/2: Difference between revisions
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== why CC<sub>1/2</sub> can be negative == | == why CC<sub>1/2</sub> can be negative == | ||
If the numerator of the formula becomes negative, CC<sub>1/2</sub> is negative. This happens if the variance of the average intensities across the unique reflections of a resolution shell is low, but the individual measurements of each unique reflection vary strongly. This is discussed in §4.1 of [https://cms.uni-konstanz.de/index.php?eID=tx_nawsecuredl&u=0&g=0&t=1475179096&hash=5cf64234a23a794a1894c5408384c57208d7b602&file=fileadmin/biologie/ag-strucbio/pdfs/Assman2016_JApplCryst.pdf Assmann, G., Brehm, W. and Diederichs, K. (2016) Identification of rogue datasets in serial crystallography (2016) J. Appl. Cryst. 49, 1021-1028.] | If the numerator of the formula becomes negative, CC<sub>1/2</sub> is negative. This happens if the variance of the average intensities across the unique reflections of a resolution shell is low, but the individual measurements of each unique reflection vary strongly. This is discussed in §4.1 of [https://cms.uni-konstanz.de/index.php?eID=tx_nawsecuredl&u=0&g=0&t=1475179096&hash=5cf64234a23a794a1894c5408384c57208d7b602&file=fileadmin/biologie/ag-strucbio/pdfs/Assman2016_JApplCryst.pdf Assmann, G., Brehm, W. and Diederichs, K. (2016) Identification of rogue datasets in serial crystallography (2016) J. Appl. Cryst. 49, 1021-1028.] | ||
== Implementation == | |||
This way of calculating CC1/2 is implemented in [[XDSCC12]] and in [http://www.desy.de/~twhite/crystfel/relnotes-0.8.0 CrystFEL]. | |||