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This script generates XDS.INP based on a list of frame names supplied on the commandline. It currently works for MarCCD, ADSC, Pilatus, Eiger, some Rigaku and one Bruker detector(s); | This script generates XDS.INP based on a list of frame names supplied on the commandline. It currently works for MarCCD, ADSC, Pilatus, Eiger, some Rigaku and one Bruker detector(s); there is also some support for microED with SMV files which have a wavelength given as 0 (look for "experimental-ED" in the script). Since this is just a bash script, extension to other detectors should be very easy. | ||
== Usage == | == Usage == | ||
Line 10: | Line 10: | ||
== The script == | == The script == | ||
<!-- leave a blank line after <pre>! KD 10/2023 --> | |||
<div class="toccolours mw-collapsible mw-collapsed"> | |||
Expand code section below (i.e. click on blue <code>[Expand]</code> at the end of this line if there is no code visible) | |||
<div class="mw-collapsible-content"> | |||
<pre> | <pre> | ||
#!/bin/bash | #!/bin/bash | ||
# purpose: generate XDS.INP | # purpose: generate XDS.INP | ||
Line 143: | Line 148: | ||
# revision 1.17 . JMK 31/05/2023 fix sed error for Mac, where \| is not supported | # revision 1.17 . JMK 31/05/2023 fix sed error for Mac, where \| is not supported | ||
# revision 1.18 . JMK 19/08/2023 Pilatus 12M support, give help msg if $5 defined (i.e. unquoted frame pattern) | # revision 1.18 . JMK 19/08/2023 Pilatus 12M support, give help msg if $5 defined (i.e. unquoted frame pattern) | ||
REVISION="1. | # revision 1.19 . KD 14/10/2023 Pilatus 12M at DLS I23 has reverse phi. Fix download commands. | ||
REVISION="1.19 (14-Oct-2023)" | |||
# | # | ||
Line 559: | Line 565: | ||
# Known detectors for reversed-phi at SSRF BL18U1 (S/N 60-0123) and BL19U1 (S/N XX-XXX) (!; 2019-10-19: staff will fix this) | # Known detectors for reversed-phi at SSRF BL18U1 (S/N 60-0123) and BL19U1 (S/N XX-XXX) (!; 2019-10-19: staff will fix this) | ||
DET_SN=`grep "Detector:" tmp2 | sed "s/^.*Detector: *//"` | DET_SN=`grep "Detector:" tmp2 | sed "s/^.*Detector: *//"` | ||
echo detector serial number is $DET_SN | |||
REVERSEPHI_SNs=" | REVERSEPHI_SNs=" | ||
PILATUS3 6M, S/N 60-0125 | PILATUS3 6M, S/N 60-0125 | ||
Line 565: | Line 572: | ||
PILATUS3 6M, S/N 60-0127 | PILATUS3 6M, S/N 60-0127 | ||
PILATUS3 6M, S/N 60-0123 | PILATUS3 6M, S/N 60-0123 | ||
PILATUS 12M, S/N 120-0100 | |||
" | " | ||
if echo "${DET_SN}${REVERSEPHI_SNs}" | sort | uniq -d | grep [0-9] > /dev/null; then | if echo "${DET_SN}${REVERSEPHI_SNs}" | sort | uniq -d | grep [0-9] > /dev/null; then | ||
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if [ -e $durin_path ]; then | if [ -e $durin_path ]; then | ||
LIB="LIB=$durin_path" | LIB="LIB=$durin_path" | ||
echo "LIB= <durin-plugin> was written to XDS.INP . Check the path! For Apple M1 processors, modify the name or set \$ | echo "LIB= <durin-plugin> was written to XDS.INP . Check the path! For Apple M1 processors, modify the name or set \$DURIN_PATH." | ||
else | else | ||
LIB="!LIB=/usr/local/lib64/durin-plugin.so" | LIB="!LIB=/usr/local/lib64/durin-plugin.so" | ||
echo "durin-plugin.so not found. Specify LIB=<path-to-durin-plugin> in XDS.INP -- set \$ | echo "durin-plugin.so not found. Specify LIB=<path-to-durin-plugin> in XDS.INP -- set \$DURIN_PATH to specify the path!" | ||
fi | fi | ||
fi | fi | ||
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# end of generate_XDS.INP | # end of generate_XDS.INP | ||
</pre> | </pre> | ||
</div> | |||
</div> | |||
== System-wide or personal installation == | == System-wide or personal installation == | ||
Ask your system adminstrator to cut-and-paste the script into e.g. /usr/local/bin/generate_XDS.INP, and to make it "executable". | Ask your system adminstrator to cut-and-paste the script into e.g. /usr/local/bin/generate_XDS.INP, and to make it "executable". | ||
If you work with Eiger data, you may want to specify the environment variables NEGGIA_PATH or DURIN_PATH, to point to the correct path on your system of the Dectris' Neggia library, or the Durin plugin, respectively. This relieves users from having to change the LIB= line of XDS.INP for every data set. You should also insert that path into the Menu / Settings / "generic library" in [[XDSGUI]] . | |||
But you may also cut-and-paste the script from this webpage into a file in e.g. your home directory (or better, into your ~/bin directory if that is in your $PATH); the filename should be generate_XDS.INP. After creating the file, make it executable - e.g. if it's in your $HOME, use: | |||
But you may also cut-and-paste the script from this webpage into a file in e.g. your home directory; the filename should be generate_XDS.INP. After creating the file, make it executable - e.g. if it's in your $HOME, use: | |||
chmod +x ~/generate_XDS.INP | chmod +x ~/generate_XDS.INP | ||
After that, you can just run it in a similar way as if it were installed in your $PATH: | After that, you can just run it in a similar way as if it were installed in your $PATH: | ||
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wget http://wiki.uni-konstanz.de/xds/index.php/generate_XDS.INP -O - | \ | wget http://wiki.uni-konstanz.de/xds/index.php/generate_XDS.INP -O - | \ | ||
sed -e s/\ \;/\ /g -e s/\>\;/\>/g -e s/\<\;/\</g -e s/amp\;//g -e s/\"\;/\"/g -e s/\&\#\1\6\0\;/\ /g | \ | sed -e s/\ \;/\ /g -e s/\>\;/\>/g -e s/\<\;/\</g -e s/amp\;//g -e s/\"\;/\"/g -e s/\&\#\1\6\0\;/\ /g | \ | ||
sed - | sed '/# end of generate_XDS.INP/,$d' | sed -n '/#!\/bin\/bash/,/# end of generate_XDS.INP/p' > generate_XDS.INP | ||
chmod +x generate_XDS.INP | chmod +x generate_XDS.INP | ||
</pre> | </pre> | ||
Line 1,326: | Line 1,335: | ||
curl -L -o - http://wiki.uni-konstanz.de/xds/index.php/generate_XDS.INP | \ | curl -L -o - http://wiki.uni-konstanz.de/xds/index.php/generate_XDS.INP | \ | ||
sed -e s/\ \;/\ /g -e s/\>\;/\>/g -e s/\<\;/\</g -e s/amp\;//g -e s/\"\;/\"/g -e s/\&\#\1\6\0\;/\ /g | \ | sed -e s/\ \;/\ /g -e s/\>\;/\>/g -e s/\<\;/\</g -e s/amp\;//g -e s/\"\;/\"/g -e s/\&\#\1\6\0\;/\ /g | \ | ||
sed - | sed '/# end of generate_XDS.INP/,$d' | sed -n '/#!\/bin\/bash/,/# end of generate_XDS.INP/p' > generate_XDS.INP | ||
chmod +x generate_XDS.INP | chmod +x generate_XDS.INP | ||
</pre> | </pre> | ||
If you do use cut-and-paste from the webpage, be aware of the following problem report: On the Mac, after loading frames, by clicking “generate XDS.INP”, the program gives some strange symbol “Ô in XDS.INP. And the more you click “save” button, the more “Ô appear. This looks like e.g. <br>SPACE_GROUP_NUMBER=0 à ! 0 if unknown <br>UNIT_CELL_CONSTANTS= 70 80 90 90 90 90 à <br> ''The problem is due to the “Rich text” format in TextEdit when saving "generate_XDS.INP". It is solved by re-downloading the script, and changing format to Plain - everything should work then.'' | If you do use cut-and-paste from the webpage, be aware of the following problem report: On the Mac, after loading frames, by clicking “generate XDS.INP”, the program gives some strange symbol “Ô in XDS.INP. And the more you click “save” button, the more “Ô appear. This looks like e.g. <br>SPACE_GROUP_NUMBER=0 à ! 0 if unknown <br>UNIT_CELL_CONSTANTS= 70 80 90 90 90 90 à <br> ''The problem is due to the “Rich text” format in TextEdit when saving "generate_XDS.INP". It is solved by re-downloading the script, and changing format to Plain - everything should work then.'' | ||
== Calling generate_XDS.INP from a Python script == | == Calling generate_XDS.INP from a Python script == | ||
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== Dependencies == | == Dependencies == | ||
The script makes use of many GNU commands, like <code>ls, grep, egrep, awk, cut, cat, echo, wc, bc, head, sed, tail, cp, od, python</code>. Some of them (like <code>od</code> and <code>python</code>) are only used in case of specific detectors (MarCCD and RAXIS, respectively). | The script makes use of many GNU commands, like <code>ls, grep, egrep, awk, cut, cat, echo, wc, bc, head, sed, tail, cp, od, python</code>. Some of them (like <code>od</code> and <code>python</code>) are only used in case of specific detectors (MarCCD and RAXIS, respectively). | ||
The script will only work if all the required commands are available. They reside in either the <code>coreutils</code> | The script will only work if all the required commands are available. They reside in either the <code>coreutils</code> package, or specific packages (<code>gawk, sed, bc, grep, python</code> ...). Please note that to get the <code>strings</code> command on some Linux distributions, you need to install the <code>binutils</code> package. | ||
For Eiger data processing, the <code>h5dump</code> program must be installed. This is part of <code>hdf5-tools</code> (Ubuntu) or <code>hdf5</code> (RHEL). The .h5 files collected at Diamond Light Source require a very new version of h5dump (namely h5dump 1.10) to extract the OVERLOAD parameter from the .h5 file; this version is available by default in Ubuntu 20.04 and RHEL/CentOS 8. | For Eiger data processing, the <code>h5dump</code> program must be installed. This is part of <code>hdf5-tools</code> (Ubuntu) or <code>hdf5</code> (RHEL). The .h5 files collected at Diamond Light Source require a very new version of h5dump (namely h5dump 1.10) to extract the OVERLOAD parameter from the .h5 file; this version is available by default in Ubuntu 20.04 and RHEL/CentOS 8. | ||
Line 1,367: | Line 1,374: | ||
See also [[Installation]]. | See also [[Installation]]. | ||
== Site Files == | |||
Site files may be used to add or modify parameters for specific hardware configurations. The primary use is for SEGMENT definitions of multi-segment detectors, and may also override FRACTION_OF_POLARIZATION, ROTATION_AXIS, TRUSTED_REGION, or UNTRUSTED_* specific to a site configuration. The site file is named ~/.xds-site/<NAME>_<SN>. The exact name will be printed by generate_XDS.INP when it is executed. | |||
[https://wiki.uni-konstanz.de/pub/linux_bin/PILATUS_12M_SN_120-0100 Site file for PILATUS 12M-DLS detector for the I23 beamline at Diamond Light Source]: | |||
<div class="toccolours mw-collapsible mw-collapsed"> | |||
Expand code section below (i.e. click on blue <code>[Expand]</code> at the end of this line if there is no code visible) | |||
<div class="mw-collapsible-content"> | |||
<pre> | |||
!-------------------------------------------------------------- | |||
! XDS Site file for Pilatus12M | |||
! Save as: ~/.xds-site/PILATUS_12M_SN_120-0100 | |||
! SEGMENT definitions translated to align frame header beam | |||
! and distance, from segments refined against 20141016/germ8979 | |||
! | |||
! generated by Juno Krahn | |||
! National Institute of Environmental Health Sciences, NIH | |||
!-------------------------------------------------------------- | |||
! SEGMENT 1 | |||
SEGMENT= 1 487 1 195 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00106 0.00008 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00023 -0.14270 0.98977 | |||
SEGMENT_ORGX= 4.83 | |||
SEGMENT_ORGY= 473.86 | |||
SEGMENT_DISTANCE= -190.77 | |||
! SEGMENT 2 | |||
SEGMENT= 495 981 1 195 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00094 0.00014 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00027 -0.14289 0.98974 | |||
SEGMENT_ORGX= 4.81 | |||
SEGMENT_ORGY= 474.08 | |||
SEGMENT_DISTANCE= -190.72 | |||
! SEGMENT 3 | |||
SEGMENT= 989 1475 1 195 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00011 0.00035 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00033 -0.14157 0.98993 | |||
SEGMENT_ORGX= 3.52 | |||
SEGMENT_ORGY= 472.75 | |||
SEGMENT_DISTANCE= -190.67 | |||
! SEGMENT 4 | |||
SEGMENT= 1483 1969 1 195 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00023 -0.00027 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00030 -0.14316 0.98970 | |||
SEGMENT_ORGX= 3.49 | |||
SEGMENT_ORGY= 473.57 | |||
SEGMENT_DISTANCE= -190.50 | |||
! SEGMENT 5 | |||
SEGMENT= 1977 2463 1 195 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00017 -0.00024 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00026 -0.14305 0.98972 | |||
SEGMENT_ORGX= 3.83 | |||
SEGMENT_ORGY= 473.58 | |||
SEGMENT_DISTANCE= -190.59 | |||
! SEGMENT 6 | |||
SEGMENT= 1 487 213 407 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00051 0.00011 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00011 0.00238 1.00000 | |||
SEGMENT_ORGX= 3.82 | |||
SEGMENT_ORGY= 309.94 | |||
SEGMENT_DISTANCE= -195.53 | |||
! SEGMENT 7 | |||
SEGMENT= 495 981 213 407 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00090 -0.00018 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00018 0.00238 1.00000 | |||
SEGMENT_ORGX= 4.48 | |||
SEGMENT_ORGY= 309.68 | |||
SEGMENT_DISTANCE= -195.51 | |||
! SEGMENT 8 | |||
SEGMENT= 989 1475 213 407 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00023 -0.00046 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00046 0.00229 1.00000 | |||
SEGMENT_ORGX= 3.28 | |||
SEGMENT_ORGY= 309.29 | |||
SEGMENT_DISTANCE= -195.33 | |||
! SEGMENT 9 | |||
SEGMENT= 1483 1969 213 407 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00020 -0.00009 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00009 0.00194 1.00000 | |||
SEGMENT_ORGX= 3.31 | |||
SEGMENT_ORGY= 310.20 | |||
SEGMENT_DISTANCE= -195.29 | |||
! SEGMENT 10 | |||
SEGMENT= 1977 2463 213 407 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00028 -0.00048 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00048 0.00221 1.00000 | |||
SEGMENT_ORGX= 4.20 | |||
SEGMENT_ORGY= 309.13 | |||
SEGMENT_DISTANCE= -195.44 | |||
! SEGMENT 11 | |||
SEGMENT= 1 487 425 619 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00021 -0.00034 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00036 0.14700 0.98914 | |||
SEGMENT_ORGX= 3.79 | |||
SEGMENT_ORGY= 146.46 | |||
SEGMENT_DISTANCE= -190.86 | |||
! SEGMENT 12 | |||
SEGMENT= 495 981 425 619 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00098 0.00012 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00002 0.14705 0.98913 | |||
SEGMENT_ORGX= 5.09 | |||
SEGMENT_ORGY= 146.20 | |||
SEGMENT_DISTANCE= -190.83 | |||
! SEGMENT 13 | |||
SEGMENT= 989 1475 425 619 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00034 -0.00060 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00065 0.14764 0.98904 | |||
SEGMENT_ORGX= 4.25 | |||
SEGMENT_ORGY= 144.79 | |||
SEGMENT_DISTANCE= -190.74 | |||
! SEGMENT 14 | |||
SEGMENT= 1483 1969 425 619 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00016 -0.00074 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00076 0.14716 0.98911 | |||
SEGMENT_ORGX= 4.12 | |||
SEGMENT_ORGY= 145.21 | |||
SEGMENT_DISTANCE= -190.69 | |||
! SEGMENT 15 | |||
SEGMENT= 1977 2463 425 619 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00023 -0.00055 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00051 0.14723 0.98910 | |||
SEGMENT_ORGX= 3.95 | |||
SEGMENT_ORGY= 145.25 | |||
SEGMENT_DISTANCE= -190.55 | |||
! SEGMENT 16 | |||
SEGMENT= 1 487 637 831 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00007 0.00022 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00019 0.28893 0.95735 | |||
SEGMENT_ORGX= 3.45 | |||
SEGMENT_ORGY= -9.50 | |||
SEGMENT_DISTANCE= -176.83 | |||
! SEGMENT 17 | |||
SEGMENT= 495 981 637 831 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00070 -0.00020 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00039 0.28888 0.95736 | |||
SEGMENT_ORGX= 4.70 | |||
SEGMENT_ORGY= -9.69 | |||
SEGMENT_DISTANCE= -176.81 | |||
! SEGMENT 18 | |||
SEGMENT= 989 1475 637 831 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00084 -0.00061 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00083 0.28961 0.95715 | |||
SEGMENT_ORGX= 5.18 | |||
SEGMENT_ORGY= -11.24 | |||
SEGMENT_DISTANCE= -176.77 | |||
! SEGMENT 19 | |||
SEGMENT= 1483 1969 637 831 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00004 -0.00059 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00055 0.28951 0.95718 | |||
SEGMENT_ORGX= 4.22 | |||
SEGMENT_ORGY= -10.88 | |||
SEGMENT_DISTANCE= -176.50 | |||
! SEGMENT 20 | |||
SEGMENT= 1977 2463 637 831 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00004 -0.00059 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00058 0.28889 0.95736 | |||
SEGMENT_ORGX= 4.18 | |||
SEGMENT_ORGY= -10.47 | |||
SEGMENT_DISTANCE= -176.63 | |||
! SEGMENT 21 | |||
SEGMENT= 1 487 849 1043 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00014 0.00006 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00001 0.42489 0.90524 | |||
SEGMENT_ORGX= 3.87 | |||
SEGMENT_ORGY= -149.76 | |||
SEGMENT_DISTANCE= -153.74 | |||
! SEGMENT 22 | |||
SEGMENT= 495 981 849 1043 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00076 0.00043 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00007 0.42509 0.90515 | |||
SEGMENT_ORGX= 5.02 | |||
SEGMENT_ORGY= -149.85 | |||
SEGMENT_DISTANCE= -153.68 | |||
! SEGMENT 23 | |||
SEGMENT= 989 1475 849 1043 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00042 -0.00107 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00115 0.42569 0.90487 | |||
SEGMENT_ORGX= 5.25 | |||
SEGMENT_ORGY= -152.03 | |||
SEGMENT_DISTANCE= -153.46 | |||
! SEGMENT 24 | |||
SEGMENT= 1483 1969 849 1043 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00011 -0.00050 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00041 0.42530 0.90505 | |||
SEGMENT_ORGX= 4.09 | |||
SEGMENT_ORGY= -150.92 | |||
SEGMENT_DISTANCE= -153.42 | |||
! SEGMENT 25 | |||
SEGMENT= 1977 2463 849 1043 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00061 -0.00050 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00019 0.42520 0.90510 | |||
SEGMENT_ORGX= 3.67 | |||
SEGMENT_ORGY= -150.36 | |||
SEGMENT_DISTANCE= -153.14 | |||
! SEGMENT 26 | |||
SEGMENT= 1 487 1061 1255 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00024 -0.00062 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00065 0.55176 0.83400 | |||
SEGMENT_ORGX= 4.50 | |||
SEGMENT_ORGY= -267.14 | |||
SEGMENT_DISTANCE= -122.15 | |||
! SEGMENT 27 | |||
SEGMENT= 495 981 1061 1255 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00104 0.00037 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00026 0.55182 0.83396 | |||
SEGMENT_ORGX= 5.05 | |||
SEGMENT_ORGY= -267.36 | |||
SEGMENT_DISTANCE= -122.12 | |||
! SEGMENT 28 | |||
SEGMENT= 989 1475 1061 1255 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00016 -0.00047 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00048 0.55207 0.83380 | |||
SEGMENT_ORGX= 4.55 | |||
SEGMENT_ORGY= -267.71 | |||
SEGMENT_DISTANCE= -121.94 | |||
! SEGMENT 29 | |||
SEGMENT= 1483 1969 1061 1255 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00003 -0.00099 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00084 0.55221 0.83371 | |||
SEGMENT_ORGX= 5.02 | |||
SEGMENT_ORGY= -268.34 | |||
SEGMENT_DISTANCE= -121.73 | |||
! SEGMENT 30 | |||
SEGMENT= 1977 2463 1061 1255 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00022 -0.00053 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00032 0.55182 0.83396 | |||
SEGMENT_ORGX= 3.99 | |||
SEGMENT_ORGY= -267.40 | |||
SEGMENT_DISTANCE= -121.75 | |||
! SEGMENT 31 | |||
SEGMENT= 1 487 1273 1467 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00015 0.00013 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00001 0.66732 0.74477 | |||
SEGMENT_ORGX= 4.14 | |||
SEGMENT_ORGY= -354.22 | |||
SEGMENT_DISTANCE= -82.50 | |||
! SEGMENT 32 | |||
SEGMENT= 495 981 1273 1467 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00063 0.00076 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00015 0.66760 0.74452 | |||
SEGMENT_ORGX= 4.31 | |||
SEGMENT_ORGY= -354.30 | |||
SEGMENT_DISTANCE= -82.42 | |||
! SEGMENT 33 | |||
SEGMENT= 989 1475 1273 1467 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00011 -0.00026 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00027 0.66758 0.74454 | |||
SEGMENT_ORGX= 4.54 | |||
SEGMENT_ORGY= -354.50 | |||
SEGMENT_DISTANCE= -82.31 | |||
! SEGMENT 34 | |||
SEGMENT= 1483 1969 1273 1467 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00046 -0.00045 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00003 0.66738 0.74472 | |||
SEGMENT_ORGX= 3.67 | |||
SEGMENT_ORGY= -353.83 | |||
SEGMENT_DISTANCE= -82.19 | |||
! SEGMENT 35 | |||
SEGMENT= 1977 2463 1273 1467 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00007 -0.00091 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00063 0.66809 0.74408 | |||
SEGMENT_ORGX= 4.46 | |||
SEGMENT_ORGY= -355.74 | |||
SEGMENT_DISTANCE= -81.76 | |||
! SEGMENT 36 | |||
SEGMENT= 1 487 1485 1679 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00016 0.00111 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00083 0.76825 0.64015 | |||
SEGMENT_ORGX= 2.59 | |||
SEGMENT_ORGY= -404.52 | |||
SEGMENT_DISTANCE= -35.97 | |||
! SEGMENT 37 | |||
SEGMENT= 495 981 1485 1679 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00094 0.00104 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00005 0.76800 0.64045 | |||
SEGMENT_ORGX= 4.62 | |||
SEGMENT_ORGY= -404.40 | |||
SEGMENT_DISTANCE= -36.21 | |||
! SEGMENT 38 | |||
SEGMENT= 989 1475 1485 1679 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00049 -0.00114 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00111 0.76871 0.63959 | |||
SEGMENT_ORGX= 6.17 | |||
SEGMENT_ORGY= -405.99 | |||
SEGMENT_DISTANCE= -35.56 | |||
! SEGMENT 39 | |||
SEGMENT= 1483 1969 1485 1679 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00030 -0.00083 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00076 0.76828 0.64012 | |||
SEGMENT_ORGX= 5.36 | |||
SEGMENT_ORGY= -405.83 | |||
SEGMENT_DISTANCE= -35.75 | |||
! SEGMENT 40 | |||
SEGMENT= 1977 2463 1485 1679 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00033 -0.00084 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00028 0.76806 0.64038 | |||
SEGMENT_ORGX= 4.15 | |||
SEGMENT_ORGY= -404.69 | |||
SEGMENT_DISTANCE= -35.60 | |||
! SEGMENT 41 | |||
SEGMENT= 1 487 1697 1891 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00012 0.00028 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00004 0.85314 0.52169 | |||
SEGMENT_ORGX= 3.87 | |||
SEGMENT_ORGY= -412.52 | |||
SEGMENT_DISTANCE= 16.72 | |||
! SEGMENT 42 | |||
SEGMENT= 495 981 1697 1891 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00052 0.00053 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00017 0.85309 0.52176 | |||
SEGMENT_ORGX= 4.44 | |||
SEGMENT_ORGY= -412.64 | |||
SEGMENT_DISTANCE= 16.63 | |||
! SEGMENT 43 | |||
SEGMENT= 989 1475 1697 1891 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00025 -0.00126 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00045 0.85311 0.52173 | |||
SEGMENT_ORGX= 5.35 | |||
SEGMENT_ORGY= -413.24 | |||
SEGMENT_DISTANCE= 16.97 | |||
! SEGMENT 44 | |||
SEGMENT= 1483 1969 1697 1891 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00092 -0.00086 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00033 0.85325 0.52150 | |||
SEGMENT_ORGX= 3.55 | |||
SEGMENT_ORGY= -411.91 | |||
SEGMENT_DISTANCE= 17.21 | |||
! SEGMENT 45 | |||
SEGMENT= 1977 2463 1697 1891 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00008 -0.00113 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00052 0.85326 0.52149 | |||
SEGMENT_ORGX= 5.13 | |||
SEGMENT_ORGY= -413.28 | |||
SEGMENT_DISTANCE= 17.35 | |||
! SEGMENT 46 | |||
SEGMENT= 1 487 1909 2103 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00028 -0.00004 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00028 0.92003 0.39185 | |||
SEGMENT_ORGX= 4.58 | |||
SEGMENT_ORGY= -374.02 | |||
SEGMENT_DISTANCE= 74.51 | |||
! SEGMENT 47 | |||
SEGMENT= 495 981 1909 2103 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00049 0.00109 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00002 0.91985 0.39227 | |||
SEGMENT_ORGX= 3.78 | |||
SEGMENT_ORGY= -374.06 | |||
SEGMENT_DISTANCE= 74.25 | |||
! SEGMENT 48 | |||
SEGMENT= 989 1475 1909 2103 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00073 -0.00102 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00107 0.92009 0.39172 | |||
SEGMENT_ORGX= 6.81 | |||
SEGMENT_ORGY= -374.77 | |||
SEGMENT_DISTANCE= 74.74 | |||
! SEGMENT 49 | |||
SEGMENT= 1483 1969 1909 2103 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00050 -0.00059 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00023 0.91986 0.39226 | |||
SEGMENT_ORGX= 3.55 | |||
SEGMENT_ORGY= -373.25 | |||
SEGMENT_DISTANCE= 74.64 | |||
! SEGMENT 50 | |||
SEGMENT= 1977 2463 1909 2103 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00023 -0.00070 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00049 0.92007 0.39176 | |||
SEGMENT_ORGX= 5.78 | |||
SEGMENT_ORGY= -374.22 | |||
SEGMENT_DISTANCE= 74.74 | |||
! SEGMENT 51 | |||
SEGMENT= 1 487 2121 2315 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00035 0.00033 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00025 0.96695 0.25495 | |||
SEGMENT_ORGX= 4.41 | |||
SEGMENT_ORGY= -285.55 | |||
SEGMENT_DISTANCE= 135.47 | |||
! SEGMENT 52 | |||
SEGMENT= 495 981 2121 2315 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00057 0.00085 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00033 0.96701 0.25473 | |||
SEGMENT_ORGX= 4.25 | |||
SEGMENT_ORGY= -285.70 | |||
SEGMENT_DISTANCE= 135.50 | |||
! SEGMENT 53 | |||
SEGMENT= 989 1475 2121 2315 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00024 -0.00056 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00038 0.96692 0.25510 | |||
SEGMENT_ORGX= 5.50 | |||
SEGMENT_ORGY= -286.05 | |||
SEGMENT_DISTANCE= 135.50 | |||
! SEGMENT 54 | |||
SEGMENT= 1483 1969 2121 2315 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00038 -0.00100 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00062 0.96709 0.25444 | |||
SEGMENT_ORGX= 6.40 | |||
SEGMENT_ORGY= -285.85 | |||
SEGMENT_DISTANCE= 135.99 | |||
! SEGMENT 55 | |||
SEGMENT= 1977 2463 2121 2315 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00036 -0.00067 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00052 0.96712 0.25433 | |||
SEGMENT_ORGX= 5.98 | |||
SEGMENT_ORGY= -285.86 | |||
SEGMENT_DISTANCE= 135.96 | |||
! SEGMENT 56 | |||
SEGMENT= 1 487 2333 2527 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00051 -0.00020 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00053 0.99369 0.11217 | |||
SEGMENT_ORGX= 5.92 | |||
SEGMENT_ORGY= -144.32 | |||
SEGMENT_DISTANCE= 199.07 | |||
! SEGMENT 57 | |||
SEGMENT= 495 981 2333 2527 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00033 0.00099 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00021 0.99374 0.11172 | |||
SEGMENT_ORGX= 3.79 | |||
SEGMENT_ORGY= -143.69 | |||
SEGMENT_DISTANCE= 199.15 | |||
! SEGMENT 58 | |||
SEGMENT= 989 1475 2333 2527 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00067 -0.00123 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00080 0.99372 0.11190 | |||
SEGMENT_ORGX= 7.88 | |||
SEGMENT_ORGY= -144.66 | |||
SEGMENT_DISTANCE= 199.42 | |||
! SEGMENT 59 | |||
SEGMENT= 1483 1969 2333 2527 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00007 -0.00038 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00011 0.99374 0.11170 | |||
SEGMENT_ORGX= 5.18 | |||
SEGMENT_ORGY= -143.35 | |||
SEGMENT_DISTANCE= 199.36 | |||
! SEGMENT 60 | |||
SEGMENT= 1977 2463 2333 2527 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00080 -0.00014 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00081 0.99380 0.11117 | |||
SEGMENT_ORGX= 6.82 | |||
SEGMENT_ORGY= -144.43 | |||
SEGMENT_DISTANCE= 199.40 | |||
! SEGMENT 61 | |||
SEGMENT= 1 487 2545 2739 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00000 0.00000 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00000 0.99944 -0.03352 | |||
SEGMENT_ORGX= 4.09 | |||
SEGMENT_ORGY= 52.67 | |||
SEGMENT_DISTANCE= 263.82 | |||
! SEGMENT 62 | |||
SEGMENT= 495 981 2545 2739 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00015 0.00057 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00017 0.99942 -0.03399 | |||
SEGMENT_ORGX= 3.77 | |||
SEGMENT_ORGY= 53.04 | |||
SEGMENT_DISTANCE= 264.14 | |||
! SEGMENT 63 | |||
SEGMENT= 989 1475 2545 2739 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00005 0.00096 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00001 0.99941 -0.03430 | |||
SEGMENT_ORGX= 2.71 | |||
SEGMENT_ORGY= 53.88 | |||
SEGMENT_DISTANCE= 264.03 | |||
! SEGMENT 64 | |||
SEGMENT= 1483 1969 2545 2739 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00000 0.00000 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00000 0.99944 -0.03352 | |||
SEGMENT_ORGX= 4.09 | |||
SEGMENT_ORGY= 52.67 | |||
SEGMENT_DISTANCE= 263.82 | |||
! SEGMENT 65 | |||
SEGMENT= 1977 2463 2545 2739 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00000 0.00000 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00000 0.99944 -0.03352 | |||
SEGMENT_ORGX= 4.09 | |||
SEGMENT_ORGY= 52.67 | |||
SEGMENT_DISTANCE= 263.82 | |||
! SEGMENT 66 | |||
SEGMENT= 1 487 2757 2951 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00049 0.00114 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00068 0.98402 -0.17805 | |||
SEGMENT_ORGX= 4.00 | |||
SEGMENT_ORGY= 303.18 | |||
SEGMENT_DISTANCE= 328.29 | |||
! SEGMENT 67 | |||
SEGMENT= 495 981 2757 2951 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00038 0.00066 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00049 0.98400 -0.17816 | |||
SEGMENT_ORGX= 4.55 | |||
SEGMENT_ORGY= 303.20 | |||
SEGMENT_DISTANCE= 328.34 | |||
! SEGMENT 68 | |||
SEGMENT= 989 1475 2757 2951 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00032 -0.00068 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00019 0.98391 -0.17866 | |||
SEGMENT_ORGX= 6.24 | |||
SEGMENT_ORGY= 304.40 | |||
SEGMENT_DISTANCE= 328.74 | |||
! SEGMENT 69 | |||
SEGMENT= 1483 1969 2757 2951 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00037 -0.00113 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00016 0.98397 -0.17834 | |||
SEGMENT_ORGX= 7.48 | |||
SEGMENT_ORGY= 303.70 | |||
SEGMENT_DISTANCE= 328.88 | |||
! SEGMENT 70 | |||
SEGMENT= 1977 2463 2757 2951 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00016 -0.00027 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00011 0.98399 -0.17824 | |||
SEGMENT_ORGX= 5.61 | |||
SEGMENT_ORGY= 303.71 | |||
SEGMENT_DISTANCE= 328.44 | |||
! SEGMENT 71 | |||
SEGMENT= 1 487 2969 3163 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00030 -0.00024 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00021 0.94770 -0.31916 | |||
SEGMENT_ORGX= 5.64 | |||
SEGMENT_ORGY= 608.83 | |||
SEGMENT_DISTANCE= 391.30 | |||
! SEGMENT 72 | |||
SEGMENT= 495 981 2969 3163 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00012 0.00040 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00024 0.94756 -0.31957 | |||
SEGMENT_ORGX= 4.12 | |||
SEGMENT_ORGY= 609.89 | |||
SEGMENT_DISTANCE= 391.43 | |||
! SEGMENT 73 | |||
SEGMENT= 989 1475 2969 3163 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00058 -0.00069 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00033 0.94764 -0.31935 | |||
SEGMENT_ORGX= 7.12 | |||
SEGMENT_ORGY= 609.07 | |||
SEGMENT_DISTANCE= 391.50 | |||
! SEGMENT 74 | |||
SEGMENT= 1483 1969 2969 3163 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00048 -0.00088 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00017 0.94769 -0.31918 | |||
SEGMENT_ORGX= 7.06 | |||
SEGMENT_ORGY= 608.83 | |||
SEGMENT_DISTANCE= 391.56 | |||
! SEGMENT 75 | |||
SEGMENT= 1977 2463 2969 3163 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00165 -0.00010 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00153 0.94753 -0.31967 | |||
SEGMENT_ORGX= 8.87 | |||
SEGMENT_ORGY= 606.87 | |||
SEGMENT_DISTANCE= 391.76 | |||
! SEGMENT 76 | |||
SEGMENT= 1 487 3181 3375 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00041 -0.00026 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00025 0.89152 -0.45299 | |||
SEGMENT_ORGX= 5.40 | |||
SEGMENT_ORGY= 964.61 | |||
SEGMENT_DISTANCE= 450.92 | |||
! SEGMENT 77 | |||
SEGMENT= 495 981 3181 3375 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00004 0.00066 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00026 0.89140 -0.45322 | |||
SEGMENT_ORGX= 3.47 | |||
SEGMENT_ORGY= 965.43 | |||
SEGMENT_DISTANCE= 450.97 | |||
! SEGMENT 78 | |||
SEGMENT= 989 1475 3181 3375 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00007 -0.00097 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00038 0.89142 -0.45318 | |||
SEGMENT_ORGX= 5.83 | |||
SEGMENT_ORGY= 965.97 | |||
SEGMENT_DISTANCE= 451.19 | |||
! SEGMENT 79 | |||
SEGMENT= 1483 1969 3181 3375 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00042 -0.00120 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00017 0.89131 -0.45339 | |||
SEGMENT_ORGX= 7.27 | |||
SEGMENT_ORGY= 966.72 | |||
SEGMENT_DISTANCE= 451.51 | |||
! SEGMENT 80 | |||
SEGMENT= 1977 2463 3181 3375 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00012 0.00005 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00013 0.89154 -0.45293 | |||
SEGMENT_ORGX= 4.23 | |||
SEGMENT_ORGY= 964.23 | |||
SEGMENT_DISTANCE= 450.89 | |||
! SEGMENT 81 | |||
SEGMENT= 1 487 3393 3587 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00041 0.00034 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00053 0.81635 -0.57756 | |||
SEGMENT_ORGX= 4.73 | |||
SEGMENT_ORGY= 1370.46 | |||
SEGMENT_DISTANCE= 506.46 | |||
! SEGMENT 82 | |||
SEGMENT= 495 981 3393 3587 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00031 -0.00018 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00015 0.81619 -0.57779 | |||
SEGMENT_ORGX= 5.45 | |||
SEGMENT_ORGY= 1371.41 | |||
SEGMENT_DISTANCE= 506.67 | |||
! SEGMENT 83 | |||
SEGMENT= 989 1475 3393 3587 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00062 -0.00059 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00017 0.81642 -0.57746 | |||
SEGMENT_ORGX= 7.02 | |||
SEGMENT_ORGY= 1370.21 | |||
SEGMENT_DISTANCE= 506.58 | |||
! SEGMENT 84 | |||
SEGMENT= 1483 1969 3393 3587 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00070 -0.00071 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00016 0.81619 -0.57778 | |||
SEGMENT_ORGX= 7.44 | |||
SEGMENT_ORGY= 1371.37 | |||
SEGMENT_DISTANCE= 506.88 | |||
! SEGMENT 85 | |||
SEGMENT= 1977 2463 3393 3587 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00098 -0.00041 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00056 0.81610 -0.57791 | |||
SEGMENT_ORGX= 7.74 | |||
SEGMENT_ORGY= 1370.96 | |||
SEGMENT_DISTANCE= 507.00 | |||
! SEGMENT 86 | |||
SEGMENT= 1 487 3605 3799 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00117 0.00085 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00026 0.72365 -0.69017 | |||
SEGMENT_ORGX= -0.95 | |||
SEGMENT_ORGY= 1822.59 | |||
SEGMENT_DISTANCE= 556.73 | |||
! SEGMENT 87 | |||
SEGMENT= 495 981 3605 3799 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00032 0.00058 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00017 0.72347 -0.69035 | |||
SEGMENT_ORGX= 1.93 | |||
SEGMENT_ORGY= 1823.31 | |||
SEGMENT_DISTANCE= 556.80 | |||
! SEGMENT 88 | |||
SEGMENT= 989 1475 3605 3799 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00037 -0.00043 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00003 0.72375 -0.69006 | |||
SEGMENT_ORGX= 5.71 | |||
SEGMENT_ORGY= 1822.09 | |||
SEGMENT_DISTANCE= 556.81 | |||
! SEGMENT 89 | |||
SEGMENT= 1483 1969 3605 3799 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00077 -0.00057 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00017 0.72366 -0.69016 | |||
SEGMENT_ORGX= 7.82 | |||
SEGMENT_ORGY= 1822.42 | |||
SEGMENT_DISTANCE= 557.04 | |||
! SEGMENT 90 | |||
SEGMENT= 1977 2463 3605 3799 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00064 -0.00079 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00008 0.72355 -0.69027 | |||
SEGMENT_ORGX= 7.16 | |||
SEGMENT_ORGY= 1823.19 | |||
SEGMENT_DISTANCE= 557.18 | |||
! SEGMENT 91 | |||
SEGMENT= 1 487 3817 4011 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00020 0.00050 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00052 0.61513 -0.78843 | |||
SEGMENT_ORGX= 4.08 | |||
SEGMENT_ORGY= 2316.53 | |||
SEGMENT_DISTANCE= 600.68 | |||
! SEGMENT 92 | |||
SEGMENT= 495 981 3817 4011 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00045 0.00073 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00030 0.61597 -0.78777 | |||
SEGMENT_ORGX= 1.75 | |||
SEGMENT_ORGY= 2312.82 | |||
SEGMENT_DISTANCE= 600.29 | |||
! SEGMENT 93 | |||
SEGMENT= 989 1475 3817 4011 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00007 -0.00044 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00030 0.61591 -0.78782 | |||
SEGMENT_ORGX= 4.50 | |||
SEGMENT_ORGY= 2313.65 | |||
SEGMENT_DISTANCE= 600.46 | |||
! SEGMENT 94 | |||
SEGMENT= 1483 1969 3817 4011 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00096 0.00050 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00099 0.61532 -0.78828 | |||
SEGMENT_ORGX= 7.42 | |||
SEGMENT_ORGY= 2314.13 | |||
SEGMENT_DISTANCE= 600.64 | |||
! SEGMENT 95 | |||
SEGMENT= 1977 2463 3817 4011 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00022 -0.00030 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00010 0.61556 -0.78809 | |||
SEGMENT_ORGX= 5.16 | |||
SEGMENT_ORGY= 2315.08 | |||
SEGMENT_DISTANCE= 600.62 | |||
! SEGMENT 96 | |||
SEGMENT= 1 487 4029 4223 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00053 0.00024 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00047 0.49448 -0.86919 | |||
SEGMENT_ORGX= 5.67 | |||
SEGMENT_ORGY= 2840.04 | |||
SEGMENT_DISTANCE= 636.75 | |||
! SEGMENT 97 | |||
SEGMENT= 495 981 4029 4223 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00022 0.00073 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00074 0.49423 -0.86933 | |||
SEGMENT_ORGX= 4.46 | |||
SEGMENT_ORGY= 2840.73 | |||
SEGMENT_DISTANCE= 636.83 | |||
! SEGMENT 98 | |||
SEGMENT= 989 1475 4029 4223 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00092 -0.00030 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00020 0.49510 -0.86884 | |||
SEGMENT_ORGX= 8.05 | |||
SEGMENT_ORGY= 2837.31 | |||
SEGMENT_DISTANCE= 636.77 | |||
! SEGMENT 99 | |||
SEGMENT= 1483 1969 4029 4223 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00018 0.00027 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00032 0.49433 -0.86928 | |||
SEGMENT_ORGX= 4.71 | |||
SEGMENT_ORGY= 2840.07 | |||
SEGMENT_DISTANCE= 636.77 | |||
! SEGMENT 100 | |||
SEGMENT= 1977 2463 4029 4223 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00091 -0.00047 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00004 0.49460 -0.86912 | |||
SEGMENT_ORGX= 8.26 | |||
SEGMENT_ORGY= 2839.42 | |||
SEGMENT_DISTANCE= 637.08 | |||
! SEGMENT 101 | |||
SEGMENT= 1 487 4241 4435 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00032 0.00022 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00032 0.36345 -0.93161 | |||
SEGMENT_ORGX= 5.33 | |||
SEGMENT_ORGY= 3390.42 | |||
SEGMENT_DISTANCE= 664.77 | |||
! SEGMENT 102 | |||
SEGMENT= 495 981 4241 4435 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00027 0.00044 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00031 0.36324 -0.93169 | |||
SEGMENT_ORGX= 2.96 | |||
SEGMENT_ORGY= 3391.32 | |||
SEGMENT_DISTANCE= 664.69 | |||
! SEGMENT 103 | |||
SEGMENT= 989 1475 4241 4435 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00101 0.00002 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00038 0.36357 -0.93157 | |||
SEGMENT_ORGX= 8.16 | |||
SEGMENT_ORGY= 3389.42 | |||
SEGMENT_DISTANCE= 664.85 | |||
! SEGMENT 104 | |||
SEGMENT= 1483 1969 4241 4435 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00059 -0.00019 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00003 0.36334 -0.93166 | |||
SEGMENT_ORGX= 6.56 | |||
SEGMENT_ORGY= 3390.71 | |||
SEGMENT_DISTANCE= 664.86 | |||
! SEGMENT 105 | |||
SEGMENT= 1977 2463 4241 4435 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00173 -0.00028 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00036 0.36352 -0.93159 | |||
SEGMENT_ORGX= 11.50 | |||
SEGMENT_ORGY= 3389.42 | |||
SEGMENT_DISTANCE= 665.23 | |||
! SEGMENT 106 | |||
SEGMENT= 1 487 4453 4647 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00058 0.00007 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00020 0.22382 -0.97463 | |||
SEGMENT_ORGX= 6.33 | |||
SEGMENT_ORGY= 3964.77 | |||
SEGMENT_DISTANCE= 684.01 | |||
! SEGMENT 107 | |||
SEGMENT= 495 981 4453 4647 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00071 -0.00041 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00055 0.22448 -0.97448 | |||
SEGMENT_ORGX= 1.76 | |||
SEGMENT_ORGY= 3962.92 | |||
SEGMENT_DISTANCE= 683.89 | |||
! SEGMENT 108 | |||
SEGMENT= 989 1475 4453 4647 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00065 0.00001 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00015 0.22437 -0.97450 | |||
SEGMENT_ORGX= 6.92 | |||
SEGMENT_ORGY= 3962.37 | |||
SEGMENT_DISTANCE= 684.06 | |||
! SEGMENT 109 | |||
SEGMENT= 1483 1969 4453 4647 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00073 -0.00120 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00101 0.22429 -0.97452 | |||
SEGMENT_ORGX= 7.71 | |||
SEGMENT_ORGY= 3964.48 | |||
SEGMENT_DISTANCE= 684.23 | |||
! SEGMENT 110 | |||
SEGMENT= 1977 2463 4453 4647 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00052 -0.00035 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00022 0.22472 -0.97442 | |||
SEGMENT_ORGX= 6.51 | |||
SEGMENT_ORGY= 3961.51 | |||
SEGMENT_DISTANCE= 684.03 | |||
! SEGMENT 111 | |||
SEGMENT= 1 487 4665 4859 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00029 0.00012 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00010 0.08035 -0.99677 | |||
SEGMENT_ORGX= 2.86 | |||
SEGMENT_ORGY= 4547.50 | |||
SEGMENT_DISTANCE= 693.99 | |||
! SEGMENT 112 | |||
SEGMENT= 495 981 4665 4859 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00088 -0.00026 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00033 0.08081 -0.99673 | |||
SEGMENT_ORGX= 0.34 | |||
SEGMENT_ORGY= 4546.02 | |||
SEGMENT_DISTANCE= 693.92 | |||
! SEGMENT 113 | |||
SEGMENT= 989 1475 4665 4859 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00118 -0.00039 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00029 0.07994 -0.99680 | |||
SEGMENT_ORGX= 8.96 | |||
SEGMENT_ORGY= 4549.58 | |||
SEGMENT_DISTANCE= 694.25 | |||
! SEGMENT 114 | |||
SEGMENT= 1483 1969 4665 4859 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00068 0.00041 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00047 0.07984 -0.99681 | |||
SEGMENT_ORGX= 6.59 | |||
SEGMENT_ORGY= 4548.65 | |||
SEGMENT_DISTANCE= 694.25 | |||
! SEGMENT 115 | |||
SEGMENT= 1977 2463 4665 4859 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00057 -0.00031 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00026 0.08104 -0.99671 | |||
SEGMENT_ORGX= 6.47 | |||
SEGMENT_ORGY= 4545.15 | |||
SEGMENT_DISTANCE= 694.14 | |||
! SEGMENT 116 | |||
SEGMENT= 1 487 4877 5071 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00100 0.00013 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00007 -0.06472 -0.99790 | |||
SEGMENT_ORGX= 7.84 | |||
SEGMENT_ORGY= 5134.69 | |||
SEGMENT_DISTANCE= 694.61 | |||
! SEGMENT 117 | |||
SEGMENT= 495 981 4877 5071 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00023 -0.00039 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00038 -0.06512 -0.99788 | |||
SEGMENT_ORGX= 2.94 | |||
SEGMENT_ORGY= 5136.66 | |||
SEGMENT_DISTANCE= 694.59 | |||
! SEGMENT 118 | |||
SEGMENT= 989 1475 4877 5071 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00054 0.00036 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00033 -0.06446 -0.99792 | |||
SEGMENT_ORGX= 6.18 | |||
SEGMENT_ORGY= 5133.17 | |||
SEGMENT_DISTANCE= 694.74 | |||
! SEGMENT 119 | |||
SEGMENT= 1483 1969 4877 5071 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 0.00061 -0.00046 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= -0.00041 -0.06543 -0.99786 | |||
SEGMENT_ORGX= 1.83 | |||
SEGMENT_ORGY= 5138.36 | |||
SEGMENT_DISTANCE= 694.32 | |||
! SEGMENT 120 | |||
SEGMENT= 1977 2463 4877 5071 | |||
DIRECTION_OF_SEGMENT_X-AXIS= 1.00000 -0.00049 0.00007 | |||
DIRECTION_OF_SEGMENT_Y-AXIS= 0.00004 -0.06464 -0.99791 | |||
SEGMENT_ORGX= 6.44 | |||
SEGMENT_ORGY= 5134.23 | |||
SEGMENT_DISTANCE= 694.72 | |||
</pre> | |||
</div> | |||
</div> | |||
== Limitations == | == Limitations == | ||
Line 1,372: | Line 2,241: | ||
* The script tries to interpret the header of the frames, so is currently limited to Dectris (Pilatus, Eiger), ADSC (Quantum), Rigaku (several types), MAR (CCD and image plate) detectors, and one Bruker detector. Other detectors need some values to be manually filled into XDS.INP - the relevant places are marked with XXX. These are detector properties (type, pixel size and number, min and max counts in a pixel), and experimental parameters like ROTATION_AXIS, OSCILLATION_RANGE, X-RAY_WAVELENGTH, DETECTOR_DISTANCE, and XORG, YORG. For fine-tuning of detector parameters, see the [http://xds.mpimf-heidelberg.mpg.de/html_doc/xds_prepare.html detector-specific templates]. | * The script tries to interpret the header of the frames, so is currently limited to Dectris (Pilatus, Eiger), ADSC (Quantum), Rigaku (several types), MAR (CCD and image plate) detectors, and one Bruker detector. Other detectors need some values to be manually filled into XDS.INP - the relevant places are marked with XXX. These are detector properties (type, pixel size and number, min and max counts in a pixel), and experimental parameters like ROTATION_AXIS, OSCILLATION_RANGE, X-RAY_WAVELENGTH, DETECTOR_DISTANCE, and XORG, YORG. For fine-tuning of detector parameters, see the [http://xds.mpimf-heidelberg.mpg.de/html_doc/xds_prepare.html detector-specific templates]. | ||
* The authors have made a "best effort" to provide a XDS.INP that results in the correct sign of the anomalous signal. In the case of one detector type (internally called Rigaku SMV) this requires reversal of one detector axis, and a negative DETECTOR_DISTANCE, as is found in some of the [http://xds.mpimf-heidelberg.mpg.de/html_doc/xds_prepare.html detector-specific templates]. '''For an unusual or unknown detector setup, the correct sign of the anomalous signal needs to be established and verified e.g. with a good dataset from a test crystal that has an anomalous signal.''' The authors do not take any responsibility for problems arising from incorrect sign of the anomalous signal, nor - obviously! - for any other mischief arising in or from data processing. | * The authors have made a "best effort" to provide a XDS.INP that results in the correct sign of the anomalous signal. In the case of one detector type (internally called Rigaku SMV) this requires reversal of one detector axis, and a negative DETECTOR_DISTANCE, as is found in some of the [http://xds.mpimf-heidelberg.mpg.de/html_doc/xds_prepare.html detector-specific templates]. '''For an unusual or unknown detector setup, the correct sign of the anomalous signal needs to be established and verified e.g. with a good dataset from a test crystal that has an anomalous signal.''' The authors do not take any responsibility for problems arising from incorrect sign of the anomalous signal, nor - obviously! - for any other mischief arising in or from data processing. | ||
* At some beamlines, the ROTATION_AXIS | * At some beamlines, the ROTATION_AXIS needs to be -1 0 0 ("backwards") instead of the usual 1 0 0 ("horizontal"), or even 0 1 0 ("vertical") like at one of the PETRA Hamburg BLs. The frame headers do not have this information, but for some beamlines the correct value has been implemented in the script. For other beamlines, the default chosen by [[generate_XDS.INP]] may be wrong and need manual correction of XDS.INP. The correct choice can be enforced by you with a [[Generate_XDS.INP#Site_Files|site file]]. Pls also see the article [[Beamline notes]]. | ||
* Sometimes, the x- and y- values of the primary beam position recorded in the header should be used for ORGY and ORGX (i.e reversed) instead of as ORGX and ORGY. For ADSC, this has been implemented in the script for | * Sometimes, the x- and y- values of the primary beam position recorded in the header should be used for ORGY and ORGX (i.e reversed) instead of as ORGX and ORGY. For ADSC, this has been implemented in the script for certain beamlines. | ||
* there are apparently several flavours of HDF5 files produced at Diamond Light Source. They differ e.g. in the naming of the header items. This means that items like NX, NY, DETECTOR_DISTANCE and number of images cannot always be determined by the [[generate_XDS.INP]] script. Example: The data at /dls/i04-1/data/2021/mx28114-9/processing/Lenye_Diamini/ThiL/ThiL found during the CCP4 2021 online Cape Town workshop. A workaround is to use e.g. xia2 pipeline=3dii to process these files, and - if needed - extract those items from its output files, e.g. from DEFAULT/NATIVE/SWEEP1/index/XDS.INP . | * there are apparently several flavours of HDF5 files produced at Diamond Light Source. They differ e.g. in the naming of the header items. This means that items like NX, NY, DETECTOR_DISTANCE and number of images cannot always be determined by the [[generate_XDS.INP]] script. Example: The data at /dls/i04-1/data/2021/mx28114-9/processing/Lenye_Diamini/ThiL/ThiL found during the CCP4 2021 online Cape Town workshop. A workaround is to use e.g. xia2 pipeline=3dii to process these files, and - if needed - extract those items from its output files, e.g. from DEFAULT/NATIVE/SWEEP1/index/XDS.INP . | ||