Eiger: Difference between revisions
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== XDS_from_H5.py script for generating XDS.INP given a master .h5 file == | == XDS_from_H5.py script for generating XDS.INP given a master .h5 file == | ||
Download XDS_from_H5.py. | |||
* Made script executable and put into /usr/local/bin. | |||
* Install [https://www.dectris.com/albula.html#main_head_navigation ALBULA API] | |||
* Install numpy (yum -y install numpy) as root if you get the error message | |||
** ImportError: No module named numpy.core.multiarray | |||
Before creating XDS.INP, modify the script according to your needs: | |||
* Point LIB= to where Neggia is saved. | |||
** Comment out LIB= if Neggia isn't used (not recommended). | |||
* Set MAXIMUM_NUMBER_OF_JOBS= and MAXIMUM_NUMBER_OF_PROCESSORS= to similar values whose product is slightly smaller than the total number of threads on your system. | |||
Once XDS.INP has been generated, make sure | |||
* No nonsense has been extracted from master.h5. | |||
* INCIDENT_BEAM_DIRECTION= corresponds to the experimental geometry. | |||
= Less efficient way of processing Eiger data, using conversion to CBF= | = Less efficient way of processing Eiger data, using conversion to CBF= |