SSX-PepT Se: Difference between revisions

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== color the 4 clusters ==
== color the 4 clusters ==
  grep xtal XSCALE.1.INP |sed s/'INPUT_FILE=..\/kay_pepT_SE_145\/xtal_//' |sed 's/.HKL//' |awk '{print $1+1}' > selection_1
  grep xtal XSCALE.1.INP |sed s/'INPUT_FILE=..\/tutorial_data\/PepT_SE_145\/xtal_//' |sed 's/.HKL//' |awk '{print $1+1}' > selection_1
  awk 'FNR==NR {a[$1]=0 ;next}{ if($2 in a){printf "%6s%5i%3s%6s%2s%4s%12.3f%8.3f%8.3f%11s\n",$1,$2,"S",$4,$5,$6,$7,$8,$9,$10} \
  awk 'FNR==NR {a[$1]=0 ;next}{ if($2 in a){printf "%6s%5i%3s%6s%2s%4s%12.3f%8.3f%8.3f%11s\n",$1,$2,"S",$4,$5,$6,$7,$8,$9,$10} \
                               else{print $0}}' selection_1 iso.pdb  >sel_1.pdb
                               else{print $0}}' selection_1 iso.pdb  >sel_1.pdb
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