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SSX-PepT Se: Difference between revisions
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xscale_isocluster -dim 3 -i all_145.hkl | tee XSCALE_ISOCLUSTER.LP | xscale_isocluster -dim 3 -i all_145.hkl | tee XSCALE_ISOCLUSTER.LP | ||
--> check output on screen (which is saved on XSCALE_ISOCLUSTER.LP) | --> check output on screen (which is saved on XSCALE_ISOCLUSTER.LP). The program says that we obtain 4 clusters. Check with coot: | ||
coot iso.pdb | |||
We don't really see the clusters as separate when looking at iso.pdb in coot. So let us just take the 4 clusters that xscale_isocluster detects as an opportunity to use groups of data sets for further work, without implying any deeper meaning of the clusters. | |||
== look at the 4 clusters == | == look at the 4 clusters == | ||
load iso.1.pdb into coot. Also load iso.2.pdb , iso.3.pdb, iso.4.pdb and use the Display Manager for switching the clusters on/off | |||
== decide which clusters one would take for structure solution == | == decide which clusters one would take for structure solution == | ||