Space group determination: Difference between revisions

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Alternative indexing possibilities taken from http://www.ccp4.ac.uk/html/reindexing.html (for R3 and R32, obverse/reverse are specified).
Alternative indexing possibilities taken from http://www.ccp4.ac.uk/html/reindexing.html (better readable at http://www.csb.yale.edu/userguides/datamanip/ccp4/ccp4i/help/modules/appendices/reindexing.html) (for R3 and R32, obverse/reverse are specified).
If you find an error in the table please send an email to kay dot diederichs at uni-konstanz dot de !
If you find an error in the table please send an email to kay dot diederichs at uni-konstanz dot de !


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[[File:Spacegroups tree2.png|800px]]
[[File:Spacegroups tree2a.png|800px]]
 
(compare International Tables for Crystallography Vol A (2006), figure 10.1.3.2)


== Space group selected by XDS: ambiguous with respect to enantiomorph and screw axes ==
== Space group selected by XDS: ambiguous with respect to enantiomorph and screw axes ==
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XDS (or rather, the [[CORRECT.LP|CORRECT]] step) makes an attempt to pick the correct space group automatically: it chooses the space group (or rather: Laue point group) which has the highest symmetry (thus yielding the lowest number of unique reflections) and still a tolerable R<sub>meas</sub> compared to the R<sub>meas</sub> the data have in any space group (which is most likely a low-symmetry space group - often P1).
XDS (or rather, the [[CORRECT.LP|CORRECT]] step) makes an attempt to pick the correct space group automatically: it chooses the space group (or rather: Laue point group) which has the highest symmetry (thus yielding the lowest number of unique reflections) and still a tolerable R<sub>meas</sub> compared to the R<sub>meas</sub> the data have in any space group (which is most likely a low-symmetry space group - often P1).


In some cases the automatic choice is the correct one, and re-running the [[CORRECT.LP|CORRECT]] step is then not necessary. However, neither the correct enantiomorph nor [[Space_group_determination#Screw_axes|screw axes]] (see below) are determined automatically by XDS. [[Pointless]] is a very good program (usually better than CORRECT) to suggest possible space group (and alternatives). See also [[Notes]] below.
In some cases the automatic choice is the correct one, and re-running the [[CORRECT.LP|CORRECT]] step is then not necessary. However, neither the correct enantiomorph nor [[Space_group_determination#Screw_axes|screw axes]] (see below) are determined automatically by XDS. [[Pointless]] is a very good program (usually better than CORRECT) to suggest possible space group (and alternatives). See also [[Space_group_determination#Notes|Notes]], and [[Space_group_determination#checking_the_CORRECT_assignment_with_pointless|checking the CORRECT assignment with pointless]] (below).


== Space group selected by user ==
== Space group selected by user ==
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