FAQ: Difference between revisions
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* [[Refinement|B-factor too high]] | * [[Refinement|B-factor too high]] | ||
* [http://pdbwiki.org/index.php/PDB_FAQ The FAQ of PDBwiki] | * [http://pdbwiki.org/index.php/PDB_FAQ The FAQ of PDBwiki] | ||
* [[why is there a difference between the Rfactors from Refmac and Sfcheck?]] | |||
* [http://www.biop.ox.ac.uk/coot/doc/coot-faq.html Coot: I get bizarre connectivity and other weirdness on reading files] if your structure looks like [http://www.ysbl.york.ac.uk/~emsley/coot/ugly.png this] | |||
* [[Conserved Waters]]: How to find waters that are conserved between two different PDB files of the same or similar structures. | |||
== See also == | == See also == | ||
* [[Common misconceptions]] about crystallography | |||
* [[Teaching crystallography]] | * [[Teaching crystallography]] | ||
* [[Other crystallography links, or collections of links]] | * [[Other crystallography links, or collections of links]] | ||
* [[Other crystallography wikis|Other crystallography-related wikis]] | * [[Other crystallography wikis|Other crystallography-related wikis]] | ||
* [http://www.ebi.ac.uk/pdbe-as/pdbestatistics/PDBeStatistics.jsp PDBeStatistics] and [http://www.p212121.com/2009/10/22/displaying-pdb-distribution-statistics/ some explanation of it] | |||
Latest revision as of 02:17, 1 September 2010
- protein is not expressed or cannot be purified
- crystals don't grow
- phases too bad
- model does not refine
- B-factor too high
- The FAQ of PDBwiki
- why is there a difference between the Rfactors from Refmac and Sfcheck?
- Coot: I get bizarre connectivity and other weirdness on reading files if your structure looks like this
- Conserved Waters: How to find waters that are conserved between two different PDB files of the same or similar structures.
