Phenix: Difference between revisions

520 bytes added ,  11 August 2011
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=== phenix.grow_density - local density improvement ===
=== phenix.grow_density - local density improvement ===
As originally described in Acta Cryst. (1997). D53, 540-543 (in development). Seems to have no specific documentation.
As originally described in Acta Cryst. (1997). D53, 540-543 (in development). There is a [http://cci.lbl.gov/~afonine/tmp/grow_density.pdf PDF] file (or [http://phenix-online.org/pipermail/phenixbb/attachments/20110811/a73f1428/attachment.htm]) to explain some parameters of phenix.grow_density. It is very sketchy and may not be 100% up-to-date.
 
Defining several spheres where the DA are going to be placed is better than defining one large sphere, although it depends on the
region size and shape. For example:
sphere {
  center = 21.698  7.730  33.974
  radius = 5
}
sphere {
  center = 23.483  10.877  35.583
  radius = 5
}


=== phenix.mtz2map ===
=== phenix.mtz2map ===
1,330

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