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> gnuplot | > gnuplot | ||
plot "frames.scales" using 1:10 | plot "frames.scales" using 1:10 | ||
It is useful to run gnuplot this way, because you can move the mouse over an outlier and see its coordinates (x=frame number) in the lower left corner of the plot window. | |||
If you do have bad outliers (e.g. shutter didn't open), and decide that you for now simply want to remove those frames, then you could rename the frames (just append ".bad" to the name), and re-run XDS from the INTEGRATE step. | |||
If you simply want the plots and glue them into your lab book, just run | |||
gnuplot<<EOF | |||
set term png | |||
set grid | |||
set out 'scale.png' | |||
plot "frames.scales" using 1:3 | |||
set out 'divergence.png' | |||
plot "frames.scales" using 1:9 | |||
set out 'mosaicity.png' | |||
plot "frames.scales" using 1:10 | |||
EOF | |||