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Xscale: Difference between revisions
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* MAXIMUM_NUMBER_OF_PROCESSORS= | * MAXIMUM_NUMBER_OF_PROCESSORS= | ||
* CORRECTIONS= | * CORRECTIONS= | ||
=== keywords | * NBATCH= | ||
=== keywords unique to XSCALE === | |||
* MERGE= ! average intensities from all input files, applies to output file | * MERGE= ! average intensities from all input files, applies to output file | ||
* WEIGHT= ! applies to input file | * WEIGHT= ! applies to input file | ||
* CRYSTAL_NAME= ! switch on radiation damage correction | * CRYSTAL_NAME= ! switch on radiation damage correction | ||
* STARTING_DOSE= ! (optional for radiation damage correction) | * STARTING_DOSE= ! (optional for radiation damage correction) | ||
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=== based on resolution shell and frame number === | === based on resolution shell and frame number === | ||
The usual (like in MOSFLM and other programs) correction based on resolution shell and frame number is performed in [[XDS]] as part of the CORRECT step - it can be switched off by omitting DECAY from the default CORRECTIONS= DECAY MODULATION ABSORP | The usual (like in MOSFLM and other programs) correction based on resolution shell and frame number is performed in [[XDS]] as part of the CORRECT step - it can be switched off by omitting DECAY from the default CORRECTIONS= DECAY MODULATION ABSORP. DECAY correction is also the default in XSCALE. | ||
It is instructive to inspect DECAY.pck (using "VIEW DECAY.pck"). This visualizes the scale factors employed by the CORRECT step (the equivalent files from XSCALE are called DECAY_*.pck); the right sidebar gives the mapping between colours and numbers. Along the horizontal axis the frame number is shown, along the vertical axis the resolution shell. | It is instructive to inspect DECAY.pck (using "VIEW DECAY.pck"). This visualizes the scale factors employed by the CORRECT step (the equivalent files from XSCALE are called DECAY_*.pck); the right sidebar gives the mapping between colours and numbers. Along the horizontal axis the frame number is shown, along the vertical axis the resolution shell. | ||