Xdsconv: Difference between revisions

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1,122 bytes added ,  27 March 2014
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In the case of a MTZ file that should be used for molecular replacement and refinement, the CAD step could be used to transfer the R_free flag from a different dataset to this new dataset. Alternatively, change of labels and transfer of columns can be done in the ccp4i GUI.
In the case of a MTZ file that should be used for molecular replacement and refinement, the CAD step could be used to transfer the R_free flag from a different dataset to this new dataset. Alternatively, change of labels and transfer of columns can be done in the ccp4i GUI.
== explanation of typical output ==
<pre>
========== CONTROL CARDS ==========
INPUT_FILE=XDS_ASCII.HKL
OUTPUT_FILE=temp.hkl CCP4
SPACE_GROUP_NUMBER=  199
UNIT_CELL_CONSTANTS=    78.09    78.09    78.09  90.000  90.000  90.000
FRIEDEL'S_LAW=FALSE
MERGE=TRUE
NUMBER OF REFLECTION RECORDS ON INPUT FILE      217611      ! observations ("spots")
NUMBER OF IGNORED REFLECTIONS (I< -3.0*SIGMA)        0        ! merged (unique) reflections, Friedels separate
NUMBER OF REFLECTIONS ACCEPTED FROM INPUT FILE  23155    ! merged (unique) reflections, Friedels separate
NUMBER OF UNIQUE REFLECTIONS ASSIGNED TO TEST SET        0
NUMBER OF UNIQUE TEST REFLECTIONS INHERITED              0
NUMBER OF UNIQUE TEST REFLECTIONS NEWLY GENERATED        0
NUMBER OF REFLECTION RECORDS ON OUTPUT FILE      12264  ! merged (unique) reflections, a Friedel pair counted as 1
NUMBER OF RECORDS ASSIGNED TO WORKING SET        12264
NUMBER OF RECORDS ASSIGNED TO TEST SET              0
</pre>
The meaning of the word "reflection" differs between the output lines; some explanation is given after the exclamnation mark.


== how to obtain a MTZ file with DANO SIGDANO F(+) SIGF(+) F(-) SIGF(-) ==
== how to obtain a MTZ file with DANO SIGDANO F(+) SIGF(+) F(-) SIGF(-) ==
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