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Eiger: Difference between revisions
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→Troubleshooting
(OSX needs to have RAMdisk created first - so remove eiger2cbf-linux reference in script) |
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== Troubleshooting == | == Troubleshooting == | ||
* make sure that master.h5 and the corresponding data.h5 files remain together as collected, and '''don't rename the data.h5 files''' - they are referred to from master.h5. If you change the names of the data.h5 files or copy them somewhere else, that link is broken unless you fix master.h5. | * make sure that master.h5 and the corresponding data.h5 files remain together as collected, and '''don't rename the data.h5 files''' - they are referred to from master.h5. If you change the names of the data.h5 files or copy them somewhere else, that link is broken unless you fix master.h5. | ||
* the programs get a lot of testing on RHEL/CentOS | * the programs get a lot of testing on RHEL/CentOS/SL. To test if the conversion program work (e.g. on uncommon distros like Mint), run it outside XDS, e.g. <pre> H5ToXds master.h5 1:100 out.cbf </pre> If this creates CBF-compressed files for the first 100 images of your dataset, all is good. | ||
== A script for faster XDS processing of Eiger data == | == A script for faster XDS processing of Eiger data == | ||