Installation
This article has some little scripts that should ease the installation of XDS and related programs.
Linux 64 bit
Log in as root, and then:
cd /usr/local/bin wget http://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/generate_XDS.INP -O - | \ sed -e s/\ \;/\ /g -e s/\>\;/\>/g -e s/\<\;/\</g -e s/amp\;//g -e s/\"\;/\"/g -e s/\&\#\1\6\0\;/\ /g | \ sed '/# end of generate_XDS.INP/,$d' | awk '/^#/,/rm -f tmp1 tmp2/' > generate_XDS.INP chmod +x generate_XDS.INP
To get XDS,
wget ftp://ftp.mpimf-heidelberg.mpg.de/pub/kabsch/XDS-INTEL64_Linux_x86_64.tar.gz | tar xvf - ln -sf XDS-INTEL64_Linux_x86_64/* .
To get XDS-Viewer,
wget ftp://turn5.biologie.uni-konstanz.de/pub/xds-viewer-0.6 -O xds-viewer ln -sf xds-viewer xdsviewer
To get XDSSTAT,
wget ftp://turn5.biologie.uni-konstanz.de/pub/xdsstat-linux64.bz2 -O xdsstat.bz2 bunzip2 xdsstat.bz2 chmod a+x xdsstat
Linux 32 bit
Log in as root, and then:
cd /usr/local/bin wget http://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/generate_XDS.INP -O - | \ sed -e s/\ \;/\ /g -e s/\>\;/\>/g -e s/\<\;/\</g -e s/amp\;//g -e s/\"\;/\"/g -e s/\&\#\1\6\0\;/\ /g | \ sed '/# end of generate_XDS.INP/,$d' | awk '/^#/,/rm -f tmp1 tmp2/' > generate_XDS.INP chmod +x generate_XDS.INP
To get XDS,
wget ftp://ftp.mpimf-heidelberg.mpg.de/pub/kabsch/XDS-IA32_Linux_x86.tar.gz | tar xvf - ln -sf XDS-IA32_Linux_x86/* .
To get XDS-Viewer,
wget ftp://turn5.biologie.uni-konstanz.de/pub/xds-viewer-0.6 -O xds-viewer ln -sf xds-viewer xdsviewer
To get XDSSTAT,
wget ftp://turn5.biologie.uni-konstanz.de/pub/xdsstat-linux32.bz2 -O xdsstat.bz2 bunzip2 xdsstat.bz2 chmod a+x xdsstat
Mac (Intel)
sudo su
(enter your root password) To get generate_XDS.INP:
cd /usr/local/bin curl -L -o - http://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/generate_XDS.INP | \ sed -e s/\ \;/\ /g -e s/\>\;/\>/g -e s/\<\;/\</g -e s/amp\;//g -e s/\"\;/\"/g -e s/\&\#\1\6\0\;/\ /g | \ sed '/# end of generate_XDS.INP/,$d' | awk '/^#/,/rm -f tmp1 tmp2/' > generate_XDS.INP chmod +x generate_XDS.INP
To get XDS, for latest OS X (Mavericks):
curl -L -o - ftp://ftp.mpimf-heidelberg.mpg.de/pub/kabsch/XDS-OSX10.9.1_Darwin13.0.0.tar.gz | tar xvf - ln -sf XDS-OSX10.9.1_Darwin13.0.0/* .
and for or older OS X:
curl -L -o - ftp://ftp.mpimf-heidelberg.mpg.de/pub/kabsch/XDS-OSX10.5.8_Darwin9.8.0.tar.gz | tar xvf - ln -sf XDS-OSX10.5.8_Darwin9.8.0/* .
(There is also a 32bit tarfile at the same site, for OS X 10.4.11; the installation would be similar) To get XDS-Viewer,
wget ftp://turn5.biologie.uni-konstanz.de/pub/xds-viewer-0.6 -O xds-viewer ln -sf xds-viewer xdsviewer
To get XDSSTAT,
wget ftp://turn5.biologie.uni-konstanz.de/pub/xdsstat-linux32.bz2 -O xdsstat.bz2 bunzip2 xdsstat.bz2 chmod a+x xdsstat