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| Line 52: |
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| Alternatively, tkdiff may be installed, or other graphical comparison programs, like meld or kdiff3. | | Alternatively, tkdiff may be installed, or other graphical comparison programs, like meld or kdiff3. |
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| == Linux 32 bit ==
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| Log in as root - we need write permission for /usr/local/bin .
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|
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| To get the [[XDS]] package,
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| <pre>
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| wget -O - ftp://ftp.mpimf-heidelberg.mpg.de/pub/kabsch/XDS-IA32_Linux_x86.tar.gz | tar xzvf -
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| ln -sf XDS-IA32_Linux_x86/* .
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| </pre>
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| To get the script [[generate_XDS.INP]] from its XDSwiki article,
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| <pre>
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| cd /usr/local/bin
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| wget http://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/generate_XDS.INP -O - | \
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| sed -e s/\ \;/\ /g -e s/\>\;/\>/g -e s/\<\;/\</g -e s/amp\;//g -e s/\"\;/\"/g -e s/\&\#\1\6\0\;/\ /g | \
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| sed '/# end of generate_XDS.INP/,$d' | awk '/^#/,/rm -f tmp1 tmp2/' > generate_XDS.INP
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| chmod +x generate_XDS.INP
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| </pre>
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| To get [[XDS-Viewer]],
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| <pre>
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| wget ftp://turn5.biologie.uni-konstanz.de/pub/xds-viewer-0.6 -O xds-viewer
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| ln -sf xds-viewer xdsviewer
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| </pre>
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| To get [[XDSSTAT]],
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| <pre>
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| wget ftp://turn5.biologie.uni-konstanz.de/pub/xdsstat-linux32.bz2 -O xdsstat.bz2
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| bunzip2 -f xdsstat.bz2
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| chmod a+x xdsstat
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| </pre>
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| To get [[XDSGUI]],
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| <pre>
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| cd /usr/local/bin
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| wget ftp://turn5.biologie.uni-konstanz.de/pub/xdsgui.rhel6.32 -O xdsgui
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| chmod a+x xdsgui
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| </pre>
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| If this binary does not work for you: there is also a statically linked binary called xdsgui.rhel5.32 . Ubuntu 14 users: please read http://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/XDSGUI#Installation if you have a problem with missing libmng2.
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|
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| It is useful to install xxdiff . The package is likely available for your distribution - google for it, or try e.g.
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| yum -y install xxdiff
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| on RedHat systems, or
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| apt-get install xxdiff
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| on Ubuntu.
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|
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| Alternatively, tkdiff may be used, or kdiff3, or meld.
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|
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|
| == Mac (Intel) == | | == Mac (Intel) == |