Tips and Tricks: Difference between revisions

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== SAD/MAD data reduction ==
== SAD/MAD data reduction ==


Run CORRECT twice, with STRICT_ABSORPTION_CORRECTION=TRUE and STRICT_ABSORPTION_CORRECTION=FALSE, and compare the results. I find that the anomalous signal in SeMet-SAD/MAD is significantly enhanced in the "Anomal Corr" and the "SigAno" disciplines with STRICT_ABSORPTION_CORRECTION=TRUE (which used to be the default in older versions but ''currently is not the default'').
Run CORRECT twice, with STRICT_ABSORPTION_CORRECTION=TRUE and STRICT_ABSORPTION_CORRECTION=FALSE, and compare the results. I find that the anomalous signal in SeMet-SAD/MAD is significantly enhanced in the "Anomal Corr" and the "SigAno" disciplines with STRICT_ABSORPTION_CORRECTION=TRUE (which used to be the default in older versions but is ''not the default since Version May 8, 2007'').


Example: 269 frames, 0.5°/frame, F222; STRICT_ABSORPTION_CORRECTION=TRUE
Example: 269 frames, 0.5°/frame, F222; STRICT_ABSORPTION_CORRECTION=TRUE
SUBSET OF INTENSITY DATA WITH SIGNAL/NOISE >= -3.0 AS FUNCTION OF RESOLUTION
 
SUBSET OF INTENSITY DATA WITH SIGNAL/NOISE >= -3.0 AS FUNCTION OF RESOLUTION
  RESOLUTION    NUMBER OF REFLECTIONS    COMPLETENESS R-FACTOR  R-FACTOR COMPARED I/SIGMA  R-meas  Rmrgd-F  Anomal  SigAno  Nano
  RESOLUTION    NUMBER OF REFLECTIONS    COMPLETENESS R-FACTOR  R-FACTOR COMPARED I/SIGMA  R-meas  Rmrgd-F  Anomal  SigAno  Nano
   LIMIT    OBSERVED  UNIQUE  POSSIBLE    OF DATA  observed  expected                                      Corr
   LIMIT    OBSERVED  UNIQUE  POSSIBLE    OF DATA  observed  expected                                      Corr
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     total      346532  124975    130172      96.0%      9.5%      9.6%  338198    9.77    11.8%    18.8%    21%  0.964  53973
     total      346532  124975    130172      96.0%      9.5%      9.6%  338198    9.77    11.8%    18.8%    21%  0.964  53973


STRICT_ABSORPTION_CORRECTION=FALSE (default since Version May 8, 2007):
same data, STRICT_ABSORPTION_CORRECTION=FALSE (default):
  SUBSET OF INTENSITY DATA WITH SIGNAL/NOISE >= -3.0 AS FUNCTION OF RESOLUTION
  SUBSET OF INTENSITY DATA WITH SIGNAL/NOISE >= -3.0 AS FUNCTION OF RESOLUTION
  RESOLUTION    NUMBER OF REFLECTIONS    COMPLETENESS R-FACTOR  R-FACTOR COMPARED I/SIGMA  R-meas  Rmrgd-F  Anomal  SigAno  Nano
  RESOLUTION    NUMBER OF REFLECTIONS    COMPLETENESS R-FACTOR  R-FACTOR COMPARED I/SIGMA  R-meas  Rmrgd-F  Anomal  SigAno  Nano
2,652

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