Crystallography: Difference between revisions
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== Crystallography Software == | == Crystallography Software == | ||
=== | |||
=== For Specific Tasks === | |||
* [[Data reduction]] | |||
* [[Molecular replacement]] (MR) | |||
* [[Substructure determination]] | |||
* [[Experimental phasing]] (SIR/MIR and SAD/MAD) | |||
* [[Automated Model building]] | |||
* [[Interactive Model building]] | |||
* [[Refinement]] | |||
* [[Model validation]] | |||
=== Automated Pipelines for Structure Solution === | |||
*[[Ants]] | |||
*[[AutoRickshaw]] | |||
*[[AutoSHARP]] | |||
*[[BALBES]] | |||
*[[BNP]] | |||
*[[Elves]] | |||
*[[Phenix]] | |||
*[[HKL2MAP]] | |||
=== Web services === | |||
*[http://www.ysbl.york.ac.uk/YSBLPrograms/servlet/controller/ChangeChoice?choice=runnablePrograms York suite (Balbes, Modsearch, Zanuda)] | |||
*[http://cluster.embl-hamburg.de/ARPwARP/remote-http.html ARP/wARP web services (model building)] | |||
=== By package === | |||
(large packages first) | (large packages first) | ||
* [[CCP4]] | * [[CCP4]] | ||
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* ... | * ... | ||
=== | ===Tricks and Tips=== | ||
* [[ | * [[Solve-TAT|Solving a structure]] | ||
* [[Buildn-TAT|Model building and refinement]] | |||
* [[Model building and refinement |
Revision as of 23:02, 6 March 2008
Crystallographic Theory
Crystallography Software
For Specific Tasks
- Data reduction
- Molecular replacement (MR)
- Substructure determination
- Experimental phasing (SIR/MIR and SAD/MAD)
- Automated Model building
- Interactive Model building
- Refinement
- Model validation
Automated Pipelines for Structure Solution
Web services
By package
(large packages first)
- CCP4
- CNS
- PHENIX
- SHELX C/D/E/L (homepage at [1])
- moleman, lsqman, ... from Uppsala Software Factory
- XDS homepage and XDSwiki
- HKL homepage
- COOT
- PyMol wiki
- O
- ARP/wARP
- SHARP homepage
- Solve/Resolve
- ...